RNA–Protein interactions for RNA: ENST00000549532.1

AC023161.1-201, humanhuman

TSL 3 BASIC

Gene AC023161.1, Length 420 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023161.1-201ENST00000549532 AEBP2Q6ZN18 517 aaPredicted RBP28.02■■■□□ 2.08
AC023161.1-201ENST00000549532 CHIC1Q5VXU3 224 aa25.95■■□□□ 1.74
AC023161.1-201ENST00000549532 SENP3Q9H4L4 574 aaPredicted RBP23.93■■□□□ 1.42
AC023161.1-201ENST00000549532 PHF23Q9BUL5 403 aaPredicted RBP23.51■■□□□ 1.35
AC023161.1-201ENST00000549532 POTEDQ86YR6 584 aa23.43■■□□□ 1.34
AC023161.1-201ENST00000549532 FOXD1Q16676 465 aa22.59■■□□□ 1.21
AC023161.1-201ENST00000549532 MSH5O43196 834 aa21.5■■□□□ 1.03
AC023161.1-201ENST00000549532 PLPPR3Q6T4P5 718 aa21.17■□□□□ 0.98
AC023161.1-201ENST00000549532 PIAS4Q8N2W9 510 aaPredicted RBP20.72■□□□□ 0.91
AC023161.1-201ENST00000549532 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
AC023161.1-201ENST00000549532 ADRA2BP18089 450 aa19.98■□□□□ 0.79
AC023161.1-201ENST00000549532 CACNB1Q02641 598 aaPredicted RBP19.33■□□□□ 0.68
AC023161.1-201ENST00000549532 KCNA4P22459 653 aa18.96■□□□□ 0.63
AC023161.1-201ENST00000549532 NISCHQ9Y2I1 1504 aa18.87■□□□□ 0.61
AC023161.1-201ENST00000549532 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
AC023161.1-201ENST00000549532 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
AC023161.1-201ENST00000549532 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
AC023161.1-201ENST00000549532 NCBP3Q53F19 620 aaKnown RBP18.42■□□□□ 0.54
AC023161.1-201ENST00000549532 ABCC9O60706 1549 aa18.39■□□□□ 0.53
AC023161.1-201ENST00000549532 EHMT2Q96KQ7 1210 aa18.33■□□□□ 0.52
AC023161.1-201ENST00000549532 RNF39Q9H2S5 420 aa18.31■□□□□ 0.52
AC023161.1-201ENST00000549532 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
AC023161.1-201ENST00000549532 SCAF1Q9H7N4 1312 aaKnown RBP18.16■□□□□ 0.5
AC023161.1-201ENST00000549532 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
AC023161.1-201ENST00000549532 DCAF8L1A6NGE4 600 aa18.1■□□□□ 0.49
AC023161.1-201ENST00000549532 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
AC023161.1-201ENST00000549532 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
AC023161.1-201ENST00000549532 POTEHQ6S545 545 aa18.04■□□□□ 0.48
AC023161.1-201ENST00000549532 C1QBPQ07021 282 aaKnown RBP17.89■□□□□ 0.45
AC023161.1-201ENST00000549532 CSRNP3Q8WYN3 585 aa17.87■□□□□ 0.45
AC023161.1-201ENST00000549532 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
AC023161.1-201ENST00000549532 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
AC023161.1-201ENST00000549532 ZBTB22O15209 634 aa17.46■□□□□ 0.39
AC023161.1-201ENST00000549532 DNAJC5Q9H3Z4 198 aa17.38■□□□□ 0.37
AC023161.1-201ENST00000549532 CCDC180Q9P1Z9 1646 aa17.36■□□□□ 0.37
AC023161.1-201ENST00000549532 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
AC023161.1-201ENST00000549532 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
AC023161.1-201ENST00000549532 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
AC023161.1-201ENST00000549532 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
AC023161.1-201ENST00000549532 MYCNP04198 464 aaPredicted RBP16.76■□□□□ 0.27
AC023161.1-201ENST00000549532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
AC023161.1-201ENST00000549532 DSG3P32926 999 aa16.71■□□□□ 0.27
AC023161.1-201ENST00000549532 CECR2Q9BXF3 1484 aa16.68■□□□□ 0.26
AC023161.1-201ENST00000549532 NACADO15069 1562 aa16.68■□□□□ 0.26
AC023161.1-201ENST00000549532 ATXN8OSP0DMR3 200 aa16.66■□□□□ 0.26
AC023161.1-201ENST00000549532 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
AC023161.1-201ENST00000549532 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.24
AC023161.1-201ENST00000549532 SPINK5Q9NQ38 1064 aaPredicted RBP16.51■□□□□ 0.23
AC023161.1-201ENST00000549532 BICRAQ9NZM4 1560 aa16.51■□□□□ 0.23
AC023161.1-201ENST00000549532 DCAF8L2P0C7V8 631 aa16.5■□□□□ 0.23
AC023161.1-201ENST00000549532 CAPN15O75808 1086 aa16.45■□□□□ 0.22
AC023161.1-201ENST00000549532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
AC023161.1-201ENST00000549532 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
AC023161.1-201ENST00000549532 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
AC023161.1-201ENST00000549532 SAMD1Q6SPF0 538 aaPredicted RBP16.3■□□□□ 0.2
AC023161.1-201ENST00000549532 TRIM41Q8WV44 630 aa16.28■□□□□ 0.2
AC023161.1-201ENST00000549532 SP7Q8TDD2 431 aaPredicted RBP16.27■□□□□ 0.2
AC023161.1-201ENST00000549532 CUX2O14529 1486 aa16.26■□□□□ 0.19
AC023161.1-201ENST00000549532 SHROOM4Q9ULL8 1493 aa16.26■□□□□ 0.19
AC023161.1-201ENST00000549532 EIF4G1Q04637 1599 aaKnown RBP16.25■□□□□ 0.19
AC023161.1-201ENST00000549532 ATF5Q9Y2D1 282 aaPredicted RBP16.24■□□□□ 0.19
AC023161.1-201ENST00000549532 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
AC023161.1-201ENST00000549532 FKBP8Q14318 412 aa16.1■□□□□ 0.17
AC023161.1-201ENST00000549532 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
AC023161.1-201ENST00000549532 ABCB7O75027 752 aa16.02■□□□□ 0.16
AC023161.1-201ENST00000549532 APLP2Q06481 763 aa16.02■□□□□ 0.16
AC023161.1-201ENST00000549532 ERCC6Q03468 1493 aa16.02■□□□□ 0.15
AC023161.1-201ENST00000549532 ZNF219Q9P2Y4 722 aaPredicted RBP15.93■□□□□ 0.14
AC023161.1-201ENST00000549532 TRHP20396 242 aaPredicted RBP15.88■□□□□ 0.13
AC023161.1-201ENST00000549532 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
AC023161.1-201ENST00000549532 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
AC023161.1-201ENST00000549532 AMER1Q5JTC6 1135 aaPredicted RBP15.77■□□□□ 0.12
AC023161.1-201ENST00000549532 RTN4Q9NQC3 1192 aaKnown RBP15.72■□□□□ 0.11
AC023161.1-201ENST00000549532 MKRN4PQ13434 485 aaPredicted RBP15.57■□□□□ 0.08
AC023161.1-201ENST00000549532 HAX1O00165 279 aa15.54■□□□□ 0.08
AC023161.1-201ENST00000549532 FBLN2P98095 1184 aa15.53■□□□□ 0.08
AC023161.1-201ENST00000549532 POLA2Q14181 598 aa15.53■□□□□ 0.08
AC023161.1-201ENST00000549532 SPDYE4A6NLX3 237 aa15.52■□□□□ 0.08
AC023161.1-201ENST00000549532 DCAF1Q9Y4B6 1507 aa15.51■□□□□ 0.07
AC023161.1-201ENST00000549532 PIP4P2Q8N4L2 257 aa15.5■□□□□ 0.07
AC023161.1-201ENST00000549532 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
AC023161.1-201ENST00000549532 NESP48681 1621 aa15.47■□□□□ 0.07
AC023161.1-201ENST00000549532 PLSCR2Q9NRY7 297 aa15.43■□□□□ 0.06
AC023161.1-201ENST00000549532 ZCCHC6Q5VYS8 1495 aaKnown RBP15.42■□□□□ 0.06
AC023161.1-201ENST00000549532 EVX2Q03828 476 aa15.4■□□□□ 0.06
AC023161.1-201ENST00000549532 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
AC023161.1-201ENST00000549532 OSCARQ8IYS5 282 aa15.39■□□□□ 0.05
AC023161.1-201ENST00000549532 FBXO3Q9UK99 471 aa15.39■□□□□ 0.05
AC023161.1-201ENST00000549532 SMARCA2P51531 1590 aa15.38■□□□□ 0.05
AC023161.1-201ENST00000549532 PROM2Q8N271 834 aa15.38■□□□□ 0.05
AC023161.1-201ENST00000549532 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
AC023161.1-201ENST00000549532 BAZ1AQ9NRL2 1556 aaPredicted RBP15.34■□□□□ 0.05
AC023161.1-201ENST00000549532 LHX8Q68G74 356 aa15.25■□□□□ 0.03
AC023161.1-201ENST00000549532 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
AC023161.1-201ENST00000549532 RIMBP3CA6NJZ7 1639 aa15.24■□□□□ 0.03
AC023161.1-201ENST00000549532 RIMBP3BA6NNM3 1639 aa15.24■□□□□ 0.03
AC023161.1-201ENST00000549532 RIMBP3Q9UFD9 1639 aa15.24■□□□□ 0.03
AC023161.1-201ENST00000549532 LAMC3Q9Y6N6 1575 aa15.23■□□□□ 0.03
AC023161.1-201ENST00000549532 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
AC023161.1-201ENST00000549532 PDS5BQ9NTI5 1447 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms