RNA–Protein interactions for RNA: ENST00000447860.1

AL161646.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL161646.1, Length 1,013 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL161646.1-201ENST00000447860 AEBP2Q6ZN18 517 aaPredicted RBP26.41■■□□□ 1.82
AL161646.1-201ENST00000447860 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
AL161646.1-201ENST00000447860 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
AL161646.1-201ENST00000447860 PHF23Q9BUL5 403 aaPredicted RBP22.24■■□□□ 1.15
AL161646.1-201ENST00000447860 FOXD1Q16676 465 aa21■□□□□ 0.95
AL161646.1-201ENST00000447860 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
AL161646.1-201ENST00000447860 MSH5O43196 834 aa19.66■□□□□ 0.74
AL161646.1-201ENST00000447860 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
AL161646.1-201ENST00000447860 PIAS4Q8N2W9 510 aaPredicted RBP19.59■□□□□ 0.73
AL161646.1-201ENST00000447860 ADRA2BP18089 450 aa19.54■□□□□ 0.72
AL161646.1-201ENST00000447860 POTEDQ86YR6 584 aa19.22■□□□□ 0.67
AL161646.1-201ENST00000447860 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
AL161646.1-201ENST00000447860 MAPK8IP2Q13387 824 aaPredicted RBP17.96■□□□□ 0.47
AL161646.1-201ENST00000447860 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
AL161646.1-201ENST00000447860 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
AL161646.1-201ENST00000447860 PPP4R3CPQ6ZMV5 832 aa17.54■□□□□ 0.4
AL161646.1-201ENST00000447860 HOXD11P31277 338 aaPredicted RBP17.23■□□□□ 0.35
AL161646.1-201ENST00000447860 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
AL161646.1-201ENST00000447860 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
AL161646.1-201ENST00000447860 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
AL161646.1-201ENST00000447860 CCDC180Q9P1Z9 1646 aa16.92■□□□□ 0.3
AL161646.1-201ENST00000447860 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
AL161646.1-201ENST00000447860 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
AL161646.1-201ENST00000447860 RNF39Q9H2S5 420 aa16.79■□□□□ 0.28
AL161646.1-201ENST00000447860 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
AL161646.1-201ENST00000447860 NPM3O75607 178 aaKnown RBP16.62■□□□□ 0.25
AL161646.1-201ENST00000447860 ABCC9O60706 1549 aa16.61■□□□□ 0.25
AL161646.1-201ENST00000447860 C1QBPQ07021 282 aaKnown RBP16.55■□□□□ 0.24
AL161646.1-201ENST00000447860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.37■□□□□ 0.21
AL161646.1-201ENST00000447860 KCNA4P22459 653 aa16.27■□□□□ 0.2
AL161646.1-201ENST00000447860 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
AL161646.1-201ENST00000447860 RB1CC1Q8TDY2 1594 aa15.92■□□□□ 0.14
AL161646.1-201ENST00000447860 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
AL161646.1-201ENST00000447860 NACADO15069 1562 aa15.86■□□□□ 0.13
AL161646.1-201ENST00000447860 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
AL161646.1-201ENST00000447860 CAPN15O75808 1086 aa15.75■□□□□ 0.11
AL161646.1-201ENST00000447860 ZCCHC6Q5VYS8 1495 aaKnown RBP15.74■□□□□ 0.11
AL161646.1-201ENST00000447860 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
AL161646.1-201ENST00000447860 DSG3P32926 999 aa15.71■□□□□ 0.11
AL161646.1-201ENST00000447860 MYO15BQ96JP2 1530 aa15.71■□□□□ 0.11
AL161646.1-201ENST00000447860 UNC13AQ9UPW8 1703 aa15.71■□□□□ 0.1
AL161646.1-201ENST00000447860 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
AL161646.1-201ENST00000447860 APLP2Q06481 763 aa15.59■□□□□ 0.09
AL161646.1-201ENST00000447860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
AL161646.1-201ENST00000447860 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
AL161646.1-201ENST00000447860 BICRAQ9NZM4 1560 aa15.51■□□□□ 0.07
AL161646.1-201ENST00000447860 SAMD1Q6SPF0 538 aaPredicted RBP15.5■□□□□ 0.07
AL161646.1-201ENST00000447860 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
AL161646.1-201ENST00000447860 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
AL161646.1-201ENST00000447860 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
AL161646.1-201ENST00000447860 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
AL161646.1-201ENST00000447860 ABCB7O75027 752 aa15.38■□□□□ 0.05
AL161646.1-201ENST00000447860 MYCNP04198 464 aaPredicted RBP15.37■□□□□ 0.05
AL161646.1-201ENST00000447860 SLC4A1APQ9BWU0 796 aaKnown RBP15.35■□□□□ 0.05
AL161646.1-201ENST00000447860 SHROOM4Q9ULL8 1493 aa15.24■□□□□ 0.03
AL161646.1-201ENST00000447860 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
AL161646.1-201ENST00000447860 POLA2Q14181 598 aa15.1■□□□□ 0.01
AL161646.1-201ENST00000447860 EIF4G1Q04637 1599 aaKnown RBP15.08■□□□□ 0
AL161646.1-201ENST00000447860 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
AL161646.1-201ENST00000447860 POTEHQ6S545 545 aa15.05■□□□□ -0
AL161646.1-201ENST00000447860 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
AL161646.1-201ENST00000447860 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
AL161646.1-201ENST00000447860 ZBTB22O15209 634 aa14.97□□□□□ -0.01
AL161646.1-201ENST00000447860 CECR2Q9BXF3 1484 aa14.91□□□□□ -0.02
AL161646.1-201ENST00000447860 ZBTB12Q9Y330 459 aaPredicted RBP14.8□□□□□ -0.04
AL161646.1-201ENST00000447860 ATXN8OSP0DMR3 200 aa14.77□□□□□ -0.05
AL161646.1-201ENST00000447860 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
AL161646.1-201ENST00000447860 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
AL161646.1-201ENST00000447860 CHRDL2Q6WN34 429 aa14.65□□□□□ -0.06
AL161646.1-201ENST00000447860 AKT1S1Q96B36 256 aa14.65□□□□□ -0.06
AL161646.1-201ENST00000447860 ATAD2BQ9ULI0 1458 aa14.63□□□□□ -0.07
AL161646.1-201ENST00000447860 NCAPD3P42695 1498 aa14.61□□□□□ -0.07
AL161646.1-201ENST00000447860 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
AL161646.1-201ENST00000447860 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
AL161646.1-201ENST00000447860 HMGXB3Q12766 1538 aa14.58□□□□□ -0.08
AL161646.1-201ENST00000447860 MROH2BQ7Z745 1585 aa14.58□□□□□ -0.08
AL161646.1-201ENST00000447860 PEG3Q9GZU2 1588 aa14.57□□□□□ -0.08
AL161646.1-201ENST00000447860 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
AL161646.1-201ENST00000447860 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
AL161646.1-201ENST00000447860 WIZO95785 1651 aa14.46□□□□□ -0.09
AL161646.1-201ENST00000447860 FBLN2P98095 1184 aa14.41□□□□□ -0.1
AL161646.1-201ENST00000447860 SPDYE2BA6NHP3 402 aa14.36□□□□□ -0.11
AL161646.1-201ENST00000447860 SPDYE6P0CI01 402 aa14.36□□□□□ -0.11
AL161646.1-201ENST00000447860 SPDYE2Q495Y8 402 aa14.36□□□□□ -0.11
AL161646.1-201ENST00000447860 NESP48681 1621 aa14.36□□□□□ -0.11
AL161646.1-201ENST00000447860 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
AL161646.1-201ENST00000447860 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
AL161646.1-201ENST00000447860 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
AL161646.1-201ENST00000447860 PIP4P2Q8N4L2 257 aa14.31□□□□□ -0.12
AL161646.1-201ENST00000447860 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
AL161646.1-201ENST00000447860 ERCC6Q03468 1493 aa14.28□□□□□ -0.12
AL161646.1-201ENST00000447860 CSRNP3Q8WYN3 585 aa14.27□□□□□ -0.13
AL161646.1-201ENST00000447860 KIF21AQ7Z4S6 1674 aa14.26□□□□□ -0.13
AL161646.1-201ENST00000447860 TOP2AP11388 1531 aaKnown RBP14.25□□□□□ -0.13
AL161646.1-201ENST00000447860 FXR2P51116 673 aaKnown RBP eCLIP14.24□□□□□ -0.13
AL161646.1-201ENST00000447860 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
AL161646.1-201ENST00000447860 CUX2O14529 1486 aa14.18□□□□□ -0.14
AL161646.1-201ENST00000447860 SSUH2Q9Y2M2 353 aa14.18□□□□□ -0.14
AL161646.1-201ENST00000447860 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
AL161646.1-201ENST00000447860 CADPSQ9ULU8 1353 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms