RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 NISCHQ9Y2I1 1504 aa11.86□□□□□ -0.51
RIPK1-202ENST00000380409 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
RIPK1-202ENST00000380409 MYT1Q01538 1121 aa11.36□□□□□ -0.59
RIPK1-202ENST00000380409 HRCP23327 699 aa11.33□□□□□ -0.6
RIPK1-202ENST00000380409 DCAF8L2P0C7V8 631 aa10.99□□□□□ -0.65
RIPK1-202ENST00000380409 SCAF1Q9H7N4 1312 aaKnown RBP10.99□□□□□ -0.65
RIPK1-202ENST00000380409 SLC24A1O60721 1099 aa10.96□□□□□ -0.66
RIPK1-202ENST00000380409 TTBK1Q5TCY1 1321 aaPredicted RBP10.94□□□□□ -0.66
RIPK1-202ENST00000380409 MYO15BQ96JP2 1530 aa10.91□□□□□ -0.66
RIPK1-202ENST00000380409 PPARGC1BQ86YN6 1023 aaKnown RBP10.9□□□□□ -0.66
RIPK1-202ENST00000380409 ABCC9O60706 1549 aa10.76□□□□□ -0.69
RIPK1-202ENST00000380409 CCDC180Q9P1Z9 1646 aa10.73□□□□□ -0.69
RIPK1-202ENST00000380409 PRKCSHP14314 528 aaPredicted RBP10.67□□□□□ -0.7
RIPK1-202ENST00000380409 DCAF1Q9Y4B6 1507 aa10.66□□□□□ -0.7
RIPK1-202ENST00000380409 SUPT5HO00267 1087 aaKnown RBP10.6□□□□□ -0.71
RIPK1-202ENST00000380409 PCGF6Q9BYE7 350 aa10.59□□□□□ -0.71
RIPK1-202ENST00000380409 SHROOM4Q9ULL8 1493 aa10.53□□□□□ -0.72
RIPK1-202ENST00000380409 BCL11AQ9H165 835 aa10.52□□□□□ -0.72
RIPK1-202ENST00000380409 ACIN1Q9UKV3 1341 aaKnown RBP10.52□□□□□ -0.73
RIPK1-202ENST00000380409 FAM9AQ8IZU1 332 aaPredicted RBP10.46□□□□□ -0.73
RIPK1-202ENST00000380409 NEUROD1Q13562 356 aa10.43□□□□□ -0.74
RIPK1-202ENST00000380409 APLP2Q06481 763 aa10.41□□□□□ -0.74
RIPK1-202ENST00000380409 ZEB1P37275 1124 aaPredicted RBP10.39□□□□□ -0.75
RIPK1-202ENST00000380409 AEBP2Q6ZN18 517 aaPredicted RBP10.38□□□□□ -0.75
RIPK1-202ENST00000380409 GTF3C3Q9Y5Q9 886 aa10.34□□□□□ -0.75
RIPK1-202ENST00000380409 PABPN1Q86U42 306 aaKnown RBP eCLIP10.33□□□□□ -0.76
RIPK1-202ENST00000380409 CENPBP07199 599 aaPredicted RBP10.31□□□□□ -0.76
RIPK1-202ENST00000380409 EHMT2Q96KQ7 1210 aa10.29□□□□□ -0.76
RIPK1-202ENST00000380409 TRIM26Q12899 539 aaPredicted RBP10.29□□□□□ -0.76
RIPK1-202ENST00000380409 CHIC1Q5VXU3 224 aa10.26□□□□□ -0.77
RIPK1-202ENST00000380409 ERICH6Q7L0X2 663 aa10.25□□□□□ -0.77
RIPK1-202ENST00000380409 ANP32EQ9BTT0 268 aa10.2□□□□□ -0.78
RIPK1-202ENST00000380409 DAXXQ9UER7 740 aaPredicted RBP10.2□□□□□ -0.78
RIPK1-202ENST00000380409 CSRNP3Q8WYN3 585 aa10.07□□□□□ -0.8
RIPK1-202ENST00000380409 TRIM41Q8WV44 630 aa9.97□□□□□ -0.81
RIPK1-202ENST00000380409 TSHZ2Q9NRE2 1034 aa9.96□□□□□ -0.82
RIPK1-202ENST00000380409 DIEXFQ68CQ4 756 aaKnown RBP9.95□□□□□ -0.82
RIPK1-202ENST00000380409 DNAJC5BQ9UF47 199 aa9.95□□□□□ -0.82
RIPK1-202ENST00000380409 ZCCHC6Q5VYS8 1495 aaKnown RBP9.93□□□□□ -0.82
RIPK1-202ENST00000380409 CLSPNQ9HAW4 1339 aa9.92□□□□□ -0.82
RIPK1-202ENST00000380409 LOC105371045A0A1W2PR82 267 aa9.89□□□□□ -0.83
RIPK1-202ENST00000380409 SCRIBQ14160 1630 aa9.87□□□□□ -0.83
RIPK1-202ENST00000380409 RB1CC1Q8TDY2 1594 aa9.86□□□□□ -0.83
RIPK1-202ENST00000380409 SUPT16HQ9Y5B9 1047 aaKnown RBP9.84□□□□□ -0.83
RIPK1-202ENST00000380409 EIF5BO60841 1220 aaKnown RBP9.82□□□□□ -0.84
RIPK1-202ENST00000380409 UBE2Q2Q8WVN8 375 aa9.8□□□□□ -0.84
RIPK1-202ENST00000380409 PLEKHG5O94827 1062 aa9.77□□□□□ -0.85
RIPK1-202ENST00000380409 ANO8Q9HCE9 1232 aaPredicted RBP9.75□□□□□ -0.85
RIPK1-202ENST00000380409 NACADO15069 1562 aa9.75□□□□□ -0.85
RIPK1-202ENST00000380409 PLPPR3Q6T4P5 718 aa9.72□□□□□ -0.85
RIPK1-202ENST00000380409 ZNF316A6NFI3 1004 aaPredicted RBP9.7□□□□□ -0.86
RIPK1-202ENST00000380409 RANGAP1P46060 587 aaPredicted RBP9.7□□□□□ -0.86
RIPK1-202ENST00000380409 MIER1Q8N108 512 aa9.68□□□□□ -0.86
RIPK1-202ENST00000380409 MSH5O43196 834 aa9.68□□□□□ -0.86
RIPK1-202ENST00000380409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.65□□□□□ -0.87
RIPK1-202ENST00000380409 ERICH6BQ5W0A0 696 aa9.64□□□□□ -0.87
RIPK1-202ENST00000380409 YTHDC1Q96MU7 727 aaKnown RBP9.63□□□□□ -0.87
RIPK1-202ENST00000380409 NCBP3Q53F19 620 aaKnown RBP9.62□□□□□ -0.87
RIPK1-202ENST00000380409 MYT1LQ9UL68 1186 aa9.61□□□□□ -0.87
RIPK1-202ENST00000380409 SALL2Q9Y467 1007 aaPredicted RBP9.6□□□□□ -0.87
RIPK1-202ENST00000380409 RBM19Q9Y4C8 960 aaKnown RBP9.6□□□□□ -0.87
RIPK1-202ENST00000380409 CCER1Q8TC90 406 aaPredicted RBP9.58□□□□□ -0.88
RIPK1-202ENST00000380409 FANCIQ9NVI1 1328 aa9.58□□□□□ -0.88
RIPK1-202ENST00000380409 RTN4Q9NQC3 1192 aaKnown RBP9.57□□□□□ -0.88
RIPK1-202ENST00000380409 WRNQ14191 1432 aaPredicted RBP eCLIP9.54□□□□□ -0.88
RIPK1-202ENST00000380409 BICRAQ9NZM4 1560 aa9.51□□□□□ -0.89
RIPK1-202ENST00000380409 DEKP35659 375 aaKnown RBP9.51□□□□□ -0.89
RIPK1-202ENST00000380409 KLHL34Q8N239 644 aa9.5□□□□□ -0.89
RIPK1-202ENST00000380409 CECR2Q9BXF3 1484 aa9.5□□□□□ -0.89
RIPK1-202ENST00000380409 UNC13AQ9UPW8 1703 aa9.5□□□□□ -0.89
RIPK1-202ENST00000380409 UBTFP17480 764 aaKnown RBP9.47□□□□□ -0.89
RIPK1-202ENST00000380409 TIMELESSQ9UNS1 1208 aa9.44□□□□□ -0.9
RIPK1-202ENST00000380409 CCDC136Q96JN2 1154 aa9.43□□□□□ -0.9
RIPK1-202ENST00000380409 PKNOX2Q96KN3 472 aa9.43□□□□□ -0.9
RIPK1-202ENST00000380409 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
RIPK1-202ENST00000380409 CC2D2AQ9P2K1 1620 aa9.4□□□□□ -0.9
RIPK1-202ENST00000380409 EIF4G1Q04637 1599 aaKnown RBP9.39□□□□□ -0.91
RIPK1-202ENST00000380409 ATP1B4Q9UN42 357 aaPredicted RBP9.38□□□□□ -0.91
RIPK1-202ENST00000380409 IL27Q8NEV9 243 aa9.33□□□□□ -0.92
RIPK1-202ENST00000380409 ARXQ96QS3 562 aa9.32□□□□□ -0.92
RIPK1-202ENST00000380409 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
RIPK1-202ENST00000380409 FKBP8Q14318 412 aa9.29□□□□□ -0.92
RIPK1-202ENST00000380409 HNRNPUL2Q1KMD3 747 aaKnown RBP9.29□□□□□ -0.92
RIPK1-202ENST00000380409 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.29□□□□□ -0.92
RIPK1-202ENST00000380409 MROH2BQ7Z745 1585 aa9.29□□□□□ -0.92
RIPK1-202ENST00000380409 WASHC2AQ641Q2 1341 aa9.28□□□□□ -0.92
RIPK1-202ENST00000380409 ITGAEP38570 1179 aa9.28□□□□□ -0.92
RIPK1-202ENST00000380409 ERCC6Q03468 1493 aa9.27□□□□□ -0.92
RIPK1-202ENST00000380409 BCANQ96GW7 911 aa9.26□□□□□ -0.93
RIPK1-202ENST00000380409 BAZ1BQ9UIG0 1483 aaKnown RBP9.25□□□□□ -0.93
RIPK1-202ENST00000380409 WASHC2CQ9Y4E1 1318 aa9.25□□□□□ -0.93
RIPK1-202ENST00000380409 TULP1O00294 542 aaPredicted RBP9.24□□□□□ -0.93
RIPK1-202ENST00000380409 NESP48681 1621 aa9.24□□□□□ -0.93
RIPK1-202ENST00000380409 RSF1Q96T23 1441 aaPredicted RBP9.23□□□□□ -0.93
RIPK1-202ENST00000380409 ATAD2BQ9ULI0 1458 aa9.22□□□□□ -0.93
RIPK1-202ENST00000380409 KCNH8Q96L42 1107 aa9.21□□□□□ -0.94
RIPK1-202ENST00000380409 FBLN2P98095 1184 aa9.2□□□□□ -0.94
RIPK1-202ENST00000380409 CEP162Q5TB80 1403 aa9.19□□□□□ -0.94
RIPK1-202ENST00000380409 NOP58Q9Y2X3 529 aaKnown RBP9.19□□□□□ -0.94
RIPK1-202ENST00000380409 PAK3O75914 559 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms