Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RPS4XP23-201ENST00000487801 237 ntBASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 RAB28P4-201ENST00000622233 665 ntBASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 SPATA31D5P-201ENST00000376459 4784 ntBASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP2Q96SN8 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 HCG18-244ENST00000602516 2890 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 RNA5SP382-201ENST00000363355 112 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 DNAJA1P6-201ENST00000437347 354 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC114755.4-201ENST00000439114 443 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 PFN1P11-201ENST00000445829 389 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AKR1D1P1-201ENST00000457236 936 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC005519.1-201ENST00000554490 601 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC107958.1-201ENST00000556576 290 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 NIFKP4-201ENST00000567275 1192 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 CCL2-202ENST00000580907 736 ntTSL 2 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 RPL7AP69-201ENST00000595306 806 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC036176.3-201ENST00000602456 418 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC087501.5-201ENST00000607496 2374 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 IPO7P2-201ENST00000451446 1750 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC024267.2-201ENST00000582737 417 ntBASIC8.26□□□□□ -1.09
CDK5RAP2Q96SN8 AC020978.6-201ENST00000571197 3177 ntBASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 RN7SKP232-201ENST00000410170 290 ntBASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
CDK5RAP2Q96SN8 RPL31P11-202ENST00000454082 372 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms