RNA–Protein interactions for RNA: ENST00000616691.1

MALAT1-209, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 587 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-209ENST00000616691 AEBP2Q6ZN18 517 aaPredicted RBP20.33■□□□□ 0.85
MALAT1-209ENST00000616691 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
MALAT1-209ENST00000616691 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
MALAT1-209ENST00000616691 SENP3Q9H4L4 574 aaPredicted RBP17.26■□□□□ 0.35
MALAT1-209ENST00000616691 NISCHQ9Y2I1 1504 aa16.8■□□□□ 0.28
MALAT1-209ENST00000616691 FOXD1Q16676 465 aa16.04■□□□□ 0.16
MALAT1-209ENST00000616691 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
MALAT1-209ENST00000616691 PPP6R1Q9UPN7 881 aa15.35■□□□□ 0.05
MALAT1-209ENST00000616691 ADRA2BP18089 450 aa15.3■□□□□ 0.04
MALAT1-209ENST00000616691 PIAS4Q8N2W9 510 aaPredicted RBP15.07■□□□□ 0
MALAT1-209ENST00000616691 CCDC180Q9P1Z9 1646 aa15.06■□□□□ 0
MALAT1-209ENST00000616691 MSH5O43196 834 aa14.83□□□□□ -0.04
MALAT1-209ENST00000616691 ABCC9O60706 1549 aa14.63□□□□□ -0.07
MALAT1-209ENST00000616691 MYO15BQ96JP2 1530 aa14.16□□□□□ -0.14
MALAT1-209ENST00000616691 NACADO15069 1562 aa14.15□□□□□ -0.14
MALAT1-209ENST00000616691 RB1CC1Q8TDY2 1594 aa14.13□□□□□ -0.15
MALAT1-209ENST00000616691 PPP4R3CPQ6ZMV5 832 aa14.07□□□□□ -0.16
MALAT1-209ENST00000616691 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
MALAT1-209ENST00000616691 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
MALAT1-209ENST00000616691 ZCCHC6Q5VYS8 1495 aaKnown RBP14□□□□□ -0.17
MALAT1-209ENST00000616691 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
MALAT1-209ENST00000616691 UNC13AQ9UPW8 1703 aa13.86□□□□□ -0.19
MALAT1-209ENST00000616691 BICRAQ9NZM4 1560 aa13.79□□□□□ -0.2
MALAT1-209ENST00000616691 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.21
MALAT1-209ENST00000616691 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
MALAT1-209ENST00000616691 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
MALAT1-209ENST00000616691 SHROOM4Q9ULL8 1493 aa13.71□□□□□ -0.21
MALAT1-209ENST00000616691 POTEDQ86YR6 584 aa13.68□□□□□ -0.22
MALAT1-209ENST00000616691 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
MALAT1-209ENST00000616691 KCNA4P22459 653 aa13.63□□□□□ -0.23
MALAT1-209ENST00000616691 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
MALAT1-209ENST00000616691 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
MALAT1-209ENST00000616691 SCRIBQ14160 1630 aa13.54□□□□□ -0.24
MALAT1-209ENST00000616691 NPM3O75607 178 aaKnown RBP13.48□□□□□ -0.25
MALAT1-209ENST00000616691 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
MALAT1-209ENST00000616691 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
MALAT1-209ENST00000616691 EIF4G1Q04637 1599 aaKnown RBP13.37□□□□□ -0.27
MALAT1-209ENST00000616691 CC2D2AQ9P2K1 1620 aa13.32□□□□□ -0.28
MALAT1-209ENST00000616691 CECR2Q9BXF3 1484 aa13.22□□□□□ -0.29
MALAT1-209ENST00000616691 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
MALAT1-209ENST00000616691 NCAPD3P42695 1498 aa13.08□□□□□ -0.32
MALAT1-209ENST00000616691 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
MALAT1-209ENST00000616691 PEG3Q9GZU2 1588 aa13.05□□□□□ -0.32
MALAT1-209ENST00000616691 ATAD2BQ9ULI0 1458 aa13.02□□□□□ -0.33
MALAT1-209ENST00000616691 BAZ1AQ9NRL2 1556 aaPredicted RBP13.02□□□□□ -0.33
MALAT1-209ENST00000616691 HMGXB3Q12766 1538 aa13.01□□□□□ -0.33
MALAT1-209ENST00000616691 SMARCA2P51531 1590 aa12.98□□□□□ -0.33
MALAT1-209ENST00000616691 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
MALAT1-209ENST00000616691 MROH2BQ7Z745 1585 aa12.91□□□□□ -0.34
MALAT1-209ENST00000616691 BAZ1BQ9UIG0 1483 aaKnown RBP12.83□□□□□ -0.36
MALAT1-209ENST00000616691 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
MALAT1-209ENST00000616691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
MALAT1-209ENST00000616691 WIZO95785 1651 aa12.73□□□□□ -0.37
MALAT1-209ENST00000616691 RSF1Q96T23 1441 aaPredicted RBP12.73□□□□□ -0.37
MALAT1-209ENST00000616691 LAMC3Q9Y6N6 1575 aa12.71□□□□□ -0.37
MALAT1-209ENST00000616691 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
MALAT1-209ENST00000616691 NESP48681 1621 aa12.67□□□□□ -0.38
MALAT1-209ENST00000616691 CUX2O14529 1486 aa12.66□□□□□ -0.38
MALAT1-209ENST00000616691 TOP2AP11388 1531 aaKnown RBP12.65□□□□□ -0.38
MALAT1-209ENST00000616691 CADPSQ9ULU8 1353 aa12.62□□□□□ -0.39
MALAT1-209ENST00000616691 THOC2Q8NI27 1593 aaKnown RBP12.61□□□□□ -0.39
MALAT1-209ENST00000616691 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
MALAT1-209ENST00000616691 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
MALAT1-209ENST00000616691 ERCC6Q03468 1493 aa12.58□□□□□ -0.4
MALAT1-209ENST00000616691 CFTRP13569 1480 aa12.57□□□□□ -0.4
MALAT1-209ENST00000616691 PDS5BQ9NTI5 1447 aa12.56□□□□□ -0.4
MALAT1-209ENST00000616691 KIF21AQ7Z4S6 1674 aa12.55□□□□□ -0.4
MALAT1-209ENST00000616691 ZBTB22O15209 634 aa12.55□□□□□ -0.4
MALAT1-209ENST00000616691 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
MALAT1-209ENST00000616691 WDR62O43379 1518 aa12.49□□□□□ -0.41
MALAT1-209ENST00000616691 PRDM2Q13029 1718 aa12.47□□□□□ -0.41
MALAT1-209ENST00000616691 CCDC88BA6NC98 1476 aa12.46□□□□□ -0.41
MALAT1-209ENST00000616691 MYCNP04198 464 aaPredicted RBP12.46□□□□□ -0.41
MALAT1-209ENST00000616691 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.42
MALAT1-209ENST00000616691 FANCD2Q9BXW9 1451 aa12.43□□□□□ -0.42
MALAT1-209ENST00000616691 CEP164Q9UPV0 1460 aa12.42□□□□□ -0.42
MALAT1-209ENST00000616691 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
MALAT1-209ENST00000616691 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
MALAT1-209ENST00000616691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.39□□□□□ -0.43
MALAT1-209ENST00000616691 HNRNPUL2Q1KMD3 747 aaKnown RBP12.39□□□□□ -0.43
MALAT1-209ENST00000616691 CSRNP3Q8WYN3 585 aa12.39□□□□□ -0.43
MALAT1-209ENST00000616691 DNAJC5Q9H3Z4 198 aa12.36□□□□□ -0.43
MALAT1-209ENST00000616691 URB2Q14146 1524 aaKnown RBP12.36□□□□□ -0.43
MALAT1-209ENST00000616691 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
MALAT1-209ENST00000616691 ABCC8Q09428 1581 aa12.27□□□□□ -0.44
MALAT1-209ENST00000616691 APLP2Q06481 763 aa12.27□□□□□ -0.45
MALAT1-209ENST00000616691 TOPBP1Q92547 1522 aa12.26□□□□□ -0.45
MALAT1-209ENST00000616691 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
MALAT1-209ENST00000616691 DNMBPQ6XZF7 1577 aa12.25□□□□□ -0.45
MALAT1-209ENST00000616691 IFT140Q96RY7 1462 aa12.21□□□□□ -0.46
MALAT1-209ENST00000616691 TARBP1Q13395 1621 aaKnown RBP12.19□□□□□ -0.46
MALAT1-209ENST00000616691 CAPN15O75808 1086 aa12.17□□□□□ -0.46
MALAT1-209ENST00000616691 ATXN8OSP0DMR3 200 aa12.17□□□□□ -0.46
MALAT1-209ENST00000616691 POLA1P09884 1462 aaPredicted RBP12.15□□□□□ -0.46
MALAT1-209ENST00000616691 WDR97A6NE52 1622 aa12.14□□□□□ -0.47
MALAT1-209ENST00000616691 ZNF608Q9ULD9 1512 aaPredicted RBP12.13□□□□□ -0.47
MALAT1-209ENST00000616691 ZNF219Q9P2Y4 722 aaPredicted RBP12.13□□□□□ -0.47
MALAT1-209ENST00000616691 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
MALAT1-209ENST00000616691 CUX1P39880 1505 aa12.12□□□□□ -0.47
MALAT1-209ENST00000616691 EIF4G3O43432 1585 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms