Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 RPS19P6-201ENST00000441327 433 ntBASIC6.66□□□□□ -1.34
SSX4O60224 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 RPS18P13-201ENST00000461260 454 ntBASIC6.66□□□□□ -1.34
SSX4O60224 AC022730.2-201ENST00000465359 452 ntBASIC6.66□□□□□ -1.34
SSX4O60224 RPL34P22-201ENST00000468193 318 ntBASIC6.66□□□□□ -1.34
SSX4O60224 AC026254.2-201ENST00000475295 371 ntBASIC6.66□□□□□ -1.34
SSX4O60224 RN7SL416P-201ENST00000494042 298 ntBASIC6.66□□□□□ -1.34
SSX4O60224 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.66□□□□□ -1.34
SSX4O60224 RNU2-45P-201ENST00000516068 187 ntBASIC6.66□□□□□ -1.34
SSX4O60224 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.66□□□□□ -1.34
SSX4O60224 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.66□□□□□ -1.34
SSX4O60224 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.66□□□□□ -1.34
SSX4O60224 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SSX4O60224 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC6.66□□□□□ -1.34
SSX4O60224 STX8-209ENST00000574431 731 ntTSL 3 BASIC6.66□□□□□ -1.34
SSX4O60224 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 MARK3P1-201ENST00000604796 643 ntBASIC6.66□□□□□ -1.34
SSX4O60224 AL161912.3-201ENST00000605404 628 ntBASIC6.66□□□□□ -1.34
SSX4O60224 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.66□□□□□ -1.34
SSX4O60224 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 AL606760.4-201ENST00000617613 718 ntBASIC6.66□□□□□ -1.34
SSX4O60224 AC087893.2-201ENST00000623272 255 ntBASIC6.66□□□□□ -1.34
SSX4O60224 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SSX4O60224 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC6.66□□□□□ -1.34
SSX4O60224 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC6.66□□□□□ -1.34
SSX4O60224 AC073324.1-201ENST00000425993 1435 ntBASIC6.66□□□□□ -1.34
SSX4O60224 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
SSX4O60224 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.66□□□□□ -1.34
SSX4O60224 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSX4O60224 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SSX4O60224 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.65□□□□□ -1.34
SSX4O60224 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.65□□□□□ -1.34
SSX4O60224 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSX4O60224 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
SSX4O60224 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSX4O60224 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSX4O60224 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.65□□□□□ -1.34
SSX4O60224 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSX4O60224 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SSX4O60224 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
SSX4O60224 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.65□□□□□ -1.34
SSX4O60224 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.65□□□□□ -1.34
SSX4O60224 AC007993.1-201ENST00000621298 2430 ntBASIC6.65□□□□□ -1.34
SSX4O60224 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSX4O60224 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.34
SSX4O60224 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSX4O60224 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSX4O60224 RNA5SP355-201ENST00000365317 135 ntBASIC6.65□□□□□ -1.34
SSX4O60224 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
SSX4O60224 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
SSX4O60224 SNORA7B-201ENST00000384360 139 ntBASIC6.65□□□□□ -1.34
SSX4O60224 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.65□□□□□ -1.34
SSX4O60224 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSX4O60224 KRT18P52-201ENST00000404956 846 ntBASIC6.65□□□□□ -1.34
SSX4O60224 NPM1P36-201ENST00000415681 835 ntBASIC6.65□□□□□ -1.34
SSX4O60224 RAC1P4-201ENST00000419413 579 ntBASIC6.65□□□□□ -1.34
SSX4O60224 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
SSX4O60224 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC6.65□□□□□ -1.34
SSX4O60224 NPM1P30-201ENST00000425092 828 ntBASIC6.65□□□□□ -1.34
SSX4O60224 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SSX4O60224 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.65□□□□□ -1.34
SSX4O60224 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.65□□□□□ -1.34
SSX4O60224 SEPT14P1-201ENST00000458703 648 ntBASIC6.65□□□□□ -1.34
SSX4O60224 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.65□□□□□ -1.34
SSX4O60224 AC233724.1-201ENST00000503894 233 ntBASIC6.65□□□□□ -1.34
SSX4O60224 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.65□□□□□ -1.34
SSX4O60224 AC117383.2-201ENST00000514722 322 ntBASIC6.65□□□□□ -1.34
SSX4O60224 AP005597.2-201ENST00000526238 341 ntBASIC6.65□□□□□ -1.34
SSX4O60224 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC6.65□□□□□ -1.34
SSX4O60224 AP006296.1-201ENST00000537438 499 ntBASIC6.65□□□□□ -1.34
SSX4O60224 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
SSX4O60224 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.65□□□□□ -1.34
SSX4O60224 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC6.65□□□□□ -1.34
SSX4O60224 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.65□□□□□ -1.34
SSX4O60224 AL031429.2-201ENST00000602605 649 ntBASIC6.65□□□□□ -1.34
SSX4O60224 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC6.65□□□□□ -1.34
SSX4O60224 AC119674.1-221ENST00000641594 1213 ntBASIC6.65□□□□□ -1.34
SSX4O60224 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SSX4O60224 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
SSX4O60224 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.65□□□□□ -1.35
SSX4O60224 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
SSX4O60224 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
SSX4O60224 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms