RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 AEBP2Q6ZN18 517 aaPredicted RBP30.61■■■□□ 2.49
LINC00520-206ENST00000560336 CHIC1Q5VXU3 224 aa29.64■■■□□ 2.34
LINC00520-206ENST00000560336 PHF23Q9BUL5 403 aaPredicted RBP26.07■■□□□ 1.76
LINC00520-206ENST00000560336 SENP3Q9H4L4 574 aaPredicted RBP25.97■■□□□ 1.75
LINC00520-206ENST00000560336 FOXD1Q16676 465 aa24.16■■□□□ 1.46
LINC00520-206ENST00000560336 PLPPR3Q6T4P5 718 aa23.95■■□□□ 1.42
LINC00520-206ENST00000560336 PPP6R1Q9UPN7 881 aa23.09■■□□□ 1.29
LINC00520-206ENST00000560336 ADRA2BP18089 450 aa23.06■■□□□ 1.28
LINC00520-206ENST00000560336 PIAS4Q8N2W9 510 aaPredicted RBP22.72■■□□□ 1.23
LINC00520-206ENST00000560336 MSH5O43196 834 aa22.33■■□□□ 1.17
LINC00520-206ENST00000560336 PPP4R3CPQ6ZMV5 832 aa21.1■□□□□ 0.97
LINC00520-206ENST00000560336 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
LINC00520-206ENST00000560336 MAPK8IP2Q13387 824 aaPredicted RBP21■□□□□ 0.95
LINC00520-206ENST00000560336 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
LINC00520-206ENST00000560336 DMRT2Q9Y5R5 561 aa20.7■□□□□ 0.9
LINC00520-206ENST00000560336 CNKSR2Q8WXI2 1034 aa20.54■□□□□ 0.88
LINC00520-206ENST00000560336 NCBP3Q53F19 620 aaKnown RBP20.45■□□□□ 0.86
LINC00520-206ENST00000560336 KCNA4P22459 653 aa20.37■□□□□ 0.85
LINC00520-206ENST00000560336 NPM3O75607 178 aaKnown RBP20.18■□□□□ 0.82
LINC00520-206ENST00000560336 RNF216Q9NWF9 866 aaPredicted RBP20.18■□□□□ 0.82
LINC00520-206ENST00000560336 HOXD11P31277 338 aaPredicted RBP20.17■□□□□ 0.82
LINC00520-206ENST00000560336 DCAF8L1A6NGE4 600 aa19.86■□□□□ 0.77
LINC00520-206ENST00000560336 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
LINC00520-206ENST00000560336 SLC4A1APQ9BWU0 796 aaKnown RBP19.34■□□□□ 0.69
LINC00520-206ENST00000560336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.25■□□□□ 0.67
LINC00520-206ENST00000560336 RNF39Q9H2S5 420 aa19.13■□□□□ 0.65
LINC00520-206ENST00000560336 SLC4A2P04920 1241 aa19.12■□□□□ 0.65
LINC00520-206ENST00000560336 U3KPZ7 1027 aaPredicted RBP18.91■□□□□ 0.62
LINC00520-206ENST00000560336 C1QBPQ07021 282 aaKnown RBP18.87■□□□□ 0.61
LINC00520-206ENST00000560336 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
LINC00520-206ENST00000560336 FOXD4L1Q9NU39 408 aa18.78■□□□□ 0.6
LINC00520-206ENST00000560336 ZBTB22O15209 634 aa18.74■□□□□ 0.59
LINC00520-206ENST00000560336 MYCNP04198 464 aaPredicted RBP18.63■□□□□ 0.57
LINC00520-206ENST00000560336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
LINC00520-206ENST00000560336 HNRNPUL2Q1KMD3 747 aaKnown RBP18.55■□□□□ 0.56
LINC00520-206ENST00000560336 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
LINC00520-206ENST00000560336 SAMD1Q6SPF0 538 aaPredicted RBP18.49■□□□□ 0.55
LINC00520-206ENST00000560336 SPINK5Q9NQ38 1064 aaPredicted RBP18.47■□□□□ 0.55
LINC00520-206ENST00000560336 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
LINC00520-206ENST00000560336 APLP2Q06481 763 aa18.41■□□□□ 0.54
LINC00520-206ENST00000560336 CAPN15O75808 1086 aa18.4■□□□□ 0.54
LINC00520-206ENST00000560336 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
LINC00520-206ENST00000560336 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
LINC00520-206ENST00000560336 ATF5Q9Y2D1 282 aaPredicted RBP18.2■□□□□ 0.5
LINC00520-206ENST00000560336 DSG3P32926 999 aa18.14■□□□□ 0.49
LINC00520-206ENST00000560336 ATXN8OSP0DMR3 200 aa18.12■□□□□ 0.49
LINC00520-206ENST00000560336 ABCB7O75027 752 aa18.04■□□□□ 0.48
LINC00520-206ENST00000560336 POLA2Q14181 598 aa17.91■□□□□ 0.46
LINC00520-206ENST00000560336 NISCHQ9Y2I1 1504 aa17.61■□□□□ 0.41
LINC00520-206ENST00000560336 ZBTB12Q9Y330 459 aaPredicted RBP17.55■□□□□ 0.4
LINC00520-206ENST00000560336 FBLN2P98095 1184 aa17.41■□□□□ 0.38
LINC00520-206ENST00000560336 MKRN4PQ13434 485 aaPredicted RBP17.38■□□□□ 0.37
LINC00520-206ENST00000560336 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
LINC00520-206ENST00000560336 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
LINC00520-206ENST00000560336 SPDYE2BA6NHP3 402 aa17.07■□□□□ 0.32
LINC00520-206ENST00000560336 SPDYE6P0CI01 402 aa17.07■□□□□ 0.32
LINC00520-206ENST00000560336 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
LINC00520-206ENST00000560336 AKT1S1Q96B36 256 aa17.01■□□□□ 0.31
LINC00520-206ENST00000560336 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
LINC00520-206ENST00000560336 SSUH2Q9Y2M2 353 aa16.92■□□□□ 0.3
LINC00520-206ENST00000560336 SPDYE4A6NLX3 237 aa16.87■□□□□ 0.29
LINC00520-206ENST00000560336 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
LINC00520-206ENST00000560336 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC00520-206ENST00000560336 PITPNM1O00562 1244 aa16.68■□□□□ 0.26
LINC00520-206ENST00000560336 FKBP8Q14318 412 aa16.68■□□□□ 0.26
LINC00520-206ENST00000560336 CHRDL2Q6WN34 429 aa16.66■□□□□ 0.26
LINC00520-206ENST00000560336 SPDYE1Q8NFV5 336 aaPredicted RBP16.63■□□□□ 0.25
LINC00520-206ENST00000560336 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
LINC00520-206ENST00000560336 PROM2Q8N271 834 aa16.53■□□□□ 0.24
LINC00520-206ENST00000560336 PIP4P2Q8N4L2 257 aa16.41■□□□□ 0.22
LINC00520-206ENST00000560336 STAG3Q9UJ98 1225 aa16.41■□□□□ 0.22
LINC00520-206ENST00000560336 PRR29P0C7W0 189 aa16.4■□□□□ 0.22
LINC00520-206ENST00000560336 FXR2P51116 673 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC00520-206ENST00000560336 POTEHQ6S545 545 aa16.4■□□□□ 0.22
LINC00520-206ENST00000560336 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
LINC00520-206ENST00000560336 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
LINC00520-206ENST00000560336 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
LINC00520-206ENST00000560336 FBXO3Q9UK99 471 aa16.11■□□□□ 0.17
LINC00520-206ENST00000560336 MIER1Q8N108 512 aa16.03■□□□□ 0.16
LINC00520-206ENST00000560336 FARP1Q9Y4F1 1045 aaPredicted RBP16.03■□□□□ 0.16
LINC00520-206ENST00000560336 PLCD3Q8N3E9 789 aa15.98■□□□□ 0.15
LINC00520-206ENST00000560336 HAX1O00165 279 aa15.95■□□□□ 0.14
LINC00520-206ENST00000560336 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
LINC00520-206ENST00000560336 MNX1P50219 401 aaPredicted RBP15.94■□□□□ 0.14
LINC00520-206ENST00000560336 VASPP50552 380 aaPredicted RBP15.92■□□□□ 0.14
LINC00520-206ENST00000560336 C19orf67A6NJJ6 358 aa15.85■□□□□ 0.13
LINC00520-206ENST00000560336 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
LINC00520-206ENST00000560336 EVX2Q03828 476 aa15.82■□□□□ 0.12
LINC00520-206ENST00000560336 CD44P16070 742 aaKnown RBP15.78■□□□□ 0.12
LINC00520-206ENST00000560336 ZBTB47Q9UFB7 747 aaPredicted RBP15.77■□□□□ 0.12
LINC00520-206ENST00000560336 KLHL34Q8N239 644 aa15.72■□□□□ 0.11
LINC00520-206ENST00000560336 IFNLR1Q8IU57 520 aaPredicted RBP15.71■□□□□ 0.11
LINC00520-206ENST00000560336 SP7Q8TDD2 431 aaPredicted RBP15.66■□□□□ 0.1
LINC00520-206ENST00000560336 ZRANB1Q9UGI0 708 aa15.66■□□□□ 0.1
LINC00520-206ENST00000560336 PAK3O75914 559 aaPredicted RBP15.64■□□□□ 0.09
LINC00520-206ENST00000560336 NUBP1P53384 320 aa15.64■□□□□ 0.09
LINC00520-206ENST00000560336 RASEFQ8IZ41 740 aa15.64■□□□□ 0.09
LINC00520-206ENST00000560336 TSPYL2Q9H2G4 693 aaPredicted RBP15.63■□□□□ 0.09
LINC00520-206ENST00000560336 ZNF579Q8NAF0 562 aaKnown RBP15.55■□□□□ 0.08
LINC00520-206ENST00000560336 SPOCK2Q92563 424 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms