Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
CPS1P31327 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CPS1P31327 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
CPS1P31327 KARSP1-201ENST00000451871 1752 ntBASIC10.05□□□□□ -0.8
CPS1P31327 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC10.05□□□□□ -0.8
CPS1P31327 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CPS1P31327 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC10.05□□□□□ -0.8
CPS1P31327 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CPS1P31327 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CPS1P31327 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CPS1P31327 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
CPS1P31327 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 RAC1P4-201ENST00000419413 579 ntBASIC10.04□□□□□ -0.8
CPS1P31327 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC10.04□□□□□ -0.8
CPS1P31327 AC007919.2-201ENST00000444110 511 ntBASIC10.04□□□□□ -0.8
CPS1P31327 RN7SL88P-201ENST00000480166 299 ntBASIC10.04□□□□□ -0.8
CPS1P31327 AC005017.1-201ENST00000482002 490 ntBASIC10.04□□□□□ -0.8
CPS1P31327 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 PPIAP6-201ENST00000557078 499 ntBASIC10.04□□□□□ -0.8
CPS1P31327 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC10.04□□□□□ -0.8
CPS1P31327 AL136097.3-201ENST00000611097 505 ntBASIC10.04□□□□□ -0.8
CPS1P31327 AC017037.4-201ENST00000624526 826 ntBASIC10.04□□□□□ -0.8
CPS1P31327 SNX18P12-201ENST00000624821 759 ntBASIC10.04□□□□□ -0.8
CPS1P31327 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC10.04□□□□□ -0.8
CPS1P31327 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
CPS1P31327 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC10.04□□□□□ -0.8
CPS1P31327 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
CPS1P31327 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
CPS1P31327 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CPS1P31327 NHS-204ENST00000615422 8860 ntTSL 5 BASIC10.04□□□□□ -0.8
CPS1P31327 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
CPS1P31327 LRRC37A11P-202ENST00000579258 3717 ntBASIC10.04□□□□□ -0.8
CPS1P31327 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC10.03□□□□□ -0.8
CPS1P31327 YWHAZP6-201ENST00000399764 738 ntBASIC10.03□□□□□ -0.8
CPS1P31327 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC10.03□□□□□ -0.8
CPS1P31327 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC10.03□□□□□ -0.8
CPS1P31327 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
CPS1P31327 AC018804.1-201ENST00000430381 618 ntBASIC10.03□□□□□ -0.8
CPS1P31327 RN7SL390P-201ENST00000470634 284 ntBASIC10.03□□□□□ -0.8
CPS1P31327 SCARNA6-201ENST00000515982 265 ntBASIC10.03□□□□□ -0.8
CPS1P31327 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC10.03□□□□□ -0.8
CPS1P31327 AC023968.1-201ENST00000560719 475 ntBASIC10.03□□□□□ -0.8
CPS1P31327 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
CPS1P31327 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC10.03□□□□□ -0.8
CPS1P31327 AC011445.2-201ENST00000599274 173 ntBASIC10.03□□□□□ -0.8
CPS1P31327 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC10.03□□□□□ -0.8
CPS1P31327 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 C1D-202ENST00000407324 1379 ntTSL 3 BASIC10.03□□□□□ -0.8
CPS1P31327 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC10.03□□□□□ -0.8
CPS1P31327 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
CPS1P31327 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC10.03□□□□□ -0.8
CPS1P31327 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
CPS1P31327 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CPS1P31327 AC090643.1-201ENST00000623600 3100 ntBASIC10.03□□□□□ -0.8
CPS1P31327 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
CPS1P31327 RNU1-55P-201ENST00000365510 158 ntBASIC10.02□□□□□ -0.8
CPS1P31327 AC099782.1-201ENST00000425889 474 ntBASIC10.02□□□□□ -0.8
CPS1P31327 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC10.02□□□□□ -0.8
CPS1P31327 H3F3AP5-201ENST00000475267 429 ntBASIC10.02□□□□□ -0.8
CPS1P31327 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC10.02□□□□□ -0.8
CPS1P31327 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC10.02□□□□□ -0.8
CPS1P31327 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC10.02□□□□□ -0.8
CPS1P31327 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC10.02□□□□□ -0.8
CPS1P31327 AC108865.2-201ENST00000606881 432 ntBASIC10.02□□□□□ -0.8
CPS1P31327 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC10.02□□□□□ -0.8
CPS1P31327 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC10.02□□□□□ -0.8
CPS1P31327 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC10.02□□□□□ -0.8
CPS1P31327 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
CPS1P31327 AL356361.1-201ENST00000400943 1459 ntBASIC10.02□□□□□ -0.8
CPS1P31327 ATP5BP1-201ENST00000411980 1574 ntBASIC10.02□□□□□ -0.8
CPS1P31327 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
CPS1P31327 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC10.02□□□□□ -0.8
CPS1P31327 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
CPS1P31327 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
CPS1P31327 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms