RNA–Protein interactions for RNA: ENST00000393658.6

GPM6A-202, Transcript of glycoprotein M6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPM6A, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6A-202ENST00000393658 AEBP2Q6ZN18 517 aaPredicted RBP21.3■■□□□ 1
GPM6A-202ENST00000393658 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.8
GPM6A-202ENST00000393658 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
GPM6A-202ENST00000393658 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.47
GPM6A-202ENST00000393658 FOXD1Q16676 465 aa17.06■□□□□ 0.32
GPM6A-202ENST00000393658 NISCHQ9Y2I1 1504 aa16.56■□□□□ 0.24
GPM6A-202ENST00000393658 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
GPM6A-202ENST00000393658 MSH5O43196 834 aa16.23■□□□□ 0.19
GPM6A-202ENST00000393658 PLPPR3Q6T4P5 718 aa15.91■□□□□ 0.14
GPM6A-202ENST00000393658 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
GPM6A-202ENST00000393658 PPP6R1Q9UPN7 881 aa15.63■□□□□ 0.09
GPM6A-202ENST00000393658 ADRA2BP18089 450 aa15.58■□□□□ 0.08
GPM6A-202ENST00000393658 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
GPM6A-202ENST00000393658 SCAF1Q9H7N4 1312 aaKnown RBP14.48□□□□□ -0.09
GPM6A-202ENST00000393658 MAPK8IP2Q13387 824 aaPredicted RBP14.38□□□□□ -0.11
GPM6A-202ENST00000393658 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
GPM6A-202ENST00000393658 SHROOM4Q9ULL8 1493 aa14.05□□□□□ -0.16
GPM6A-202ENST00000393658 ZCCHC6Q5VYS8 1495 aaKnown RBP14.04□□□□□ -0.16
GPM6A-202ENST00000393658 CACNB1Q02641 598 aaPredicted RBP14.04□□□□□ -0.16
GPM6A-202ENST00000393658 HOXD11P31277 338 aaPredicted RBP13.86□□□□□ -0.19
GPM6A-202ENST00000393658 PPP4R3CPQ6ZMV5 832 aa13.85□□□□□ -0.19
GPM6A-202ENST00000393658 DCAF8L1A6NGE4 600 aa13.82□□□□□ -0.2
GPM6A-202ENST00000393658 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
GPM6A-202ENST00000393658 CNKSR2Q8WXI2 1034 aa13.72□□□□□ -0.21
GPM6A-202ENST00000393658 SUPT5HO00267 1087 aaKnown RBP13.72□□□□□ -0.21
GPM6A-202ENST00000393658 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
GPM6A-202ENST00000393658 DCAF1Q9Y4B6 1507 aa13.6□□□□□ -0.23
GPM6A-202ENST00000393658 C1QBPQ07021 282 aaKnown RBP13.6□□□□□ -0.23
GPM6A-202ENST00000393658 DNAJC5BQ9UF47 199 aa13.59□□□□□ -0.23
GPM6A-202ENST00000393658 DCAF8L2P0C7V8 631 aa13.56□□□□□ -0.24
GPM6A-202ENST00000393658 MYO15BQ96JP2 1530 aa13.44□□□□□ -0.26
GPM6A-202ENST00000393658 NCBP3Q53F19 620 aaKnown RBP13.33□□□□□ -0.28
GPM6A-202ENST00000393658 ABCC9O60706 1549 aa13.27□□□□□ -0.28
GPM6A-202ENST00000393658 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
GPM6A-202ENST00000393658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.3
GPM6A-202ENST00000393658 RSF1Q96T23 1441 aaPredicted RBP13.09□□□□□ -0.31
GPM6A-202ENST00000393658 NACADO15069 1562 aa13.02□□□□□ -0.33
GPM6A-202ENST00000393658 RB1CC1Q8TDY2 1594 aa13.01□□□□□ -0.33
GPM6A-202ENST00000393658 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
GPM6A-202ENST00000393658 LOC105371045A0A1W2PR82 267 aa12.97□□□□□ -0.33
GPM6A-202ENST00000393658 HRCP23327 699 aa12.94□□□□□ -0.34
GPM6A-202ENST00000393658 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
GPM6A-202ENST00000393658 PCGF6Q9BYE7 350 aa12.91□□□□□ -0.34
GPM6A-202ENST00000393658 MROH2BQ7Z745 1585 aa12.89□□□□□ -0.35
GPM6A-202ENST00000393658 WIZO95785 1651 aa12.84□□□□□ -0.35
GPM6A-202ENST00000393658 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
GPM6A-202ENST00000393658 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.37
GPM6A-202ENST00000393658 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
GPM6A-202ENST00000393658 DSG3P32926 999 aa12.74□□□□□ -0.37
GPM6A-202ENST00000393658 EIF4G1Q04637 1599 aaKnown RBP12.74□□□□□ -0.37
GPM6A-202ENST00000393658 UNC13AQ9UPW8 1703 aa12.73□□□□□ -0.37
GPM6A-202ENST00000393658 CAPN15O75808 1086 aa12.73□□□□□ -0.37
GPM6A-202ENST00000393658 PPARGC1BQ86YN6 1023 aaKnown RBP12.7□□□□□ -0.38
GPM6A-202ENST00000393658 POTEHQ6S545 545 aa12.69□□□□□ -0.38
GPM6A-202ENST00000393658 FAM9AQ8IZU1 332 aaPredicted RBP12.67□□□□□ -0.38
GPM6A-202ENST00000393658 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
GPM6A-202ENST00000393658 SPINK5Q9NQ38 1064 aaPredicted RBP12.67□□□□□ -0.38
GPM6A-202ENST00000393658 APLP2Q06481 763 aa12.65□□□□□ -0.38
GPM6A-202ENST00000393658 SMARCA4P51532 1647 aa12.65□□□□□ -0.39
GPM6A-202ENST00000393658 TOP2AP11388 1531 aaKnown RBP12.63□□□□□ -0.39
GPM6A-202ENST00000393658 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
GPM6A-202ENST00000393658 SMARCA2P51531 1590 aa12.57□□□□□ -0.4
GPM6A-202ENST00000393658 CCDC88BA6NC98 1476 aa12.54□□□□□ -0.4
GPM6A-202ENST00000393658 ABCC8Q09428 1581 aa12.54□□□□□ -0.4
GPM6A-202ENST00000393658 BICRAQ9NZM4 1560 aa12.52□□□□□ -0.41
GPM6A-202ENST00000393658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
GPM6A-202ENST00000393658 HNRNPUL2Q1KMD3 747 aaKnown RBP12.51□□□□□ -0.41
GPM6A-202ENST00000393658 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
GPM6A-202ENST00000393658 SLC4A2P04920 1241 aa12.47□□□□□ -0.41
GPM6A-202ENST00000393658 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
GPM6A-202ENST00000393658 KCNA4P22459 653 aa12.41□□□□□ -0.42
GPM6A-202ENST00000393658 PEG3Q9GZU2 1588 aa12.41□□□□□ -0.42
GPM6A-202ENST00000393658 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
GPM6A-202ENST00000393658 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
GPM6A-202ENST00000393658 SOGA1O94964 1423 aa12.38□□□□□ -0.43
GPM6A-202ENST00000393658 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
GPM6A-202ENST00000393658 RUSC2Q8N2Y8 1516 aa12.34□□□□□ -0.43
GPM6A-202ENST00000393658 ABCB7O75027 752 aa12.33□□□□□ -0.43
GPM6A-202ENST00000393658 SLC24A1O60721 1099 aa12.32□□□□□ -0.44
GPM6A-202ENST00000393658 CEP162Q5TB80 1403 aa12.31□□□□□ -0.44
GPM6A-202ENST00000393658 WRNQ14191 1432 aaPredicted RBP eCLIP12.3□□□□□ -0.44
GPM6A-202ENST00000393658 SYNJ1O43426 1573 aa12.29□□□□□ -0.44
GPM6A-202ENST00000393658 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
GPM6A-202ENST00000393658 EEA1Q15075 1411 aa12.28□□□□□ -0.44
GPM6A-202ENST00000393658 ATAD2BQ9ULI0 1458 aa12.28□□□□□ -0.44
GPM6A-202ENST00000393658 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.45
GPM6A-202ENST00000393658 CSRNP3Q8WYN3 585 aa12.23□□□□□ -0.45
GPM6A-202ENST00000393658 BAZ1BQ9UIG0 1483 aaKnown RBP12.23□□□□□ -0.45
GPM6A-202ENST00000393658 GOLGA3Q08378 1498 aa12.22□□□□□ -0.45
GPM6A-202ENST00000393658 KIF21BO75037 1637 aa12.2□□□□□ -0.46
GPM6A-202ENST00000393658 TTBK1Q5TCY1 1321 aaPredicted RBP12.16□□□□□ -0.46
GPM6A-202ENST00000393658 CEP164Q9UPV0 1460 aa12.15□□□□□ -0.46
GPM6A-202ENST00000393658 UBTFP17480 764 aaKnown RBP12.15□□□□□ -0.47
GPM6A-202ENST00000393658 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
GPM6A-202ENST00000393658 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
GPM6A-202ENST00000393658 CCER1Q8TC90 406 aaPredicted RBP12.11□□□□□ -0.47
GPM6A-202ENST00000393658 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
GPM6A-202ENST00000393658 RAPGEF2Q9Y4G8 1499 aa12.09□□□□□ -0.47
GPM6A-202ENST00000393658 HMGXB3Q12766 1538 aa12.07□□□□□ -0.48
GPM6A-202ENST00000393658 CLIP1P30622 1438 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms