Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 AC060766.5-201ENST00000590539 871 ntBASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HRH3Q9Y5N1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HRH3Q9Y5N1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 PGM5P4-201ENST00000421970 445 ntBASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HRH3Q9Y5N1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 AL596275.1-201ENST00000423464 877 ntBASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 AP006294.2-201ENST00000641667 209 ntBASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HRH3Q9Y5N1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 UNC93B4-201ENST00000505679 747 ntBASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HRH3Q9Y5N1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms