Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PCDHB1Q9Y5F3 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 AC105020.6-201ENST00000621523 1217 ntBASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB1Q9Y5F3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 UBE2SP1-201ENST00000450587 669 ntBASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB1Q9Y5F3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
PCDHB1Q9Y5F3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHB1Q9Y5F3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDHB1Q9Y5F3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
PCDHB1Q9Y5F3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHB1Q9Y5F3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 DPP3P2-201ENST00000416030 1696 ntBASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHB1Q9Y5F3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 AC073130.3-201ENST00000624389 2278 ntBASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB1Q9Y5F3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms