Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 HCG4P8-203ENST00000443049 980 ntBASIC18.94■□□□□ 0.62
LHX6Q9UPM6 BX664615.1-201ENST00000443558 458 ntBASIC18.94■□□□□ 0.62
LHX6Q9UPM6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.94■□□□□ 0.62
LHX6Q9UPM6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.93■□□□□ 0.62
LHX6Q9UPM6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 AC023511.2-201ENST00000618803 211 ntBASIC18.93■□□□□ 0.62
LHX6Q9UPM6 MYC-208ENST00000641036 567 ntBASIC18.93■□□□□ 0.62
LHX6Q9UPM6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX6Q9UPM6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 C1orf229-201ENST00000623686 2258 ntBASIC18.92■□□□□ 0.62
LHX6Q9UPM6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 AC007322.3-201ENST00000426526 701 ntBASIC18.92■□□□□ 0.62
LHX6Q9UPM6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.92■□□□□ 0.62
LHX6Q9UPM6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 C11orf96-202ENST00000528572 1834 ntBASIC18.92■□□□□ 0.62
LHX6Q9UPM6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 AC026471.6-201ENST00000622954 1905 ntBASIC18.92■□□□□ 0.62
LHX6Q9UPM6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX6Q9UPM6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 MTATP6P19-201ENST00000413797 659 ntBASIC18.91■□□□□ 0.62
LHX6Q9UPM6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 AP002982.1-201ENST00000492365 877 ntBASIC18.91■□□□□ 0.62
LHX6Q9UPM6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LHX6Q9UPM6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LHX6Q9UPM6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.89■□□□□ 0.61
LHX6Q9UPM6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.89■□□□□ 0.61
LHX6Q9UPM6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms