Protein–RNA interactions for Protein: Q9UGC7

MTRF1L, Peptide chain release factor 1-like, mitochondrial, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRF1LQ9UGC7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
MTRF1LQ9UGC7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
MTRF1LQ9UGC7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.64■□□□□ 0.89
MTRF1LQ9UGC7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MTRF1LQ9UGC7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MTRF1LQ9UGC7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MTRF1LQ9UGC7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 AC091305.1-201ENST00000479476 895 ntBASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 FAM21FP-204ENST00000608637 956 ntBASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 AC106739.1-201ENST00000617035 715 ntBASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 AL355001.2-201ENST00000620617 1191 ntBASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 AC004408.2-201ENST00000623613 2777 ntBASIC20.63■□□□□ 0.89
MTRF1LQ9UGC7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.62■□□□□ 0.89
MTRF1LQ9UGC7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 MIR939-201ENST00000401314 82 ntBASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 AC007322.3-201ENST00000426526 701 ntBASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 AC096631.2-201ENST00000436136 790 ntBASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 AF213884.3-201ENST00000563833 479 ntBASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTRF1LQ9UGC7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 MIR638-201ENST00000385237 100 ntBASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 DUX4L2-201ENST00000561772 1275 ntBASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 DUX4L6-201ENST00000626483 1275 ntBASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 DUX4L1-201ENST00000627662 1275 ntBASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 DUX4L8-201ENST00000629013 1275 ntBASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 DUX4L3-201ENST00000630187 1275 ntBASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 DUX4L7-201ENST00000630678 1275 ntBASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 DUX4L5-201ENST00000630834 1275 ntBASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
MTRF1LQ9UGC7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms