Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 AC027702.1-201ENST00000563810 1770 ntBASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 OR6D1P-203ENST00000641209 4860 ntBASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 AL162377.1-201ENST00000618844 1793 ntBASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
CDC42SE1Q9NRR8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 AC135983.2-203ENST00000454486 1613 ntBASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 AC144652.1-201ENST00000609974 1624 ntBASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CDC42SE1Q9NRR8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 AC006128.1-201ENST00000624704 1661 ntBASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC10.32□□□□□ -0.76
CDC42SE1Q9NRR8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms