Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.19■□□□□ 0.66
TIMMDC1Q9NPL8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TIMMDC1Q9NPL8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIMMDC1Q9NPL8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TIMMDC1Q9NPL8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 CYP2T1P-201ENST00000432607 1285 ntBASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 TSPY6P-201ENST00000448518 926 ntBASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMMDC1Q9NPL8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 AC245052.3-201ENST00000450182 901 ntBASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 AL591742.1-201ENST00000604433 565 ntBASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 OR10C1-204ENST00000622521 1039 ntBASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMMDC1Q9NPL8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 AC116562.4-201ENST00000641316 2276 ntBASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMMDC1Q9NPL8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 AL162412.1-201ENST00000567129 965 ntBASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.15■□□□□ 0.66
TIMMDC1Q9NPL8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TIMMDC1Q9NPL8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TIMMDC1Q9NPL8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TIMMDC1Q9NPL8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMMDC1Q9NPL8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMMDC1Q9NPL8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMMDC1Q9NPL8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMMDC1Q9NPL8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMMDC1Q9NPL8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMMDC1Q9NPL8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms