Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.99■■□□□ 1.11
HIPK3Q9H422 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
HIPK3Q9H422 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HIPK3Q9H422 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.99■■□□□ 1.11
HIPK3Q9H422 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIPK3Q9H422 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIPK3Q9H422 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HIPK3Q9H422 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIPK3Q9H422 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIPK3Q9H422 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
HIPK3Q9H422 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.98■■□□□ 1.11
HIPK3Q9H422 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.98■■□□□ 1.11
HIPK3Q9H422 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.98■■□□□ 1.11
HIPK3Q9H422 AC087388.1-201ENST00000571370 1112 ntBASIC21.98■■□□□ 1.11
HIPK3Q9H422 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HIPK3Q9H422 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.98■■□□□ 1.11
HIPK3Q9H422 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
HIPK3Q9H422 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK3Q9H422 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
HIPK3Q9H422 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK3Q9H422 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK3Q9H422 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK3Q9H422 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
HIPK3Q9H422 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK3Q9H422 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.97■■□□□ 1.11
HIPK3Q9H422 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.97■■□□□ 1.11
HIPK3Q9H422 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK3Q9H422 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK3Q9H422 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK3Q9H422 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIPK3Q9H422 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HIPK3Q9H422 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIPK3Q9H422 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.96■■□□□ 1.11
HIPK3Q9H422 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.96■■□□□ 1.11
HIPK3Q9H422 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIPK3Q9H422 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIPK3Q9H422 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIPK3Q9H422 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.96■■□□□ 1.11
HIPK3Q9H422 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.96■■□□□ 1.11
HIPK3Q9H422 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.96■■□□□ 1.11
HIPK3Q9H422 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.96■■□□□ 1.11
HIPK3Q9H422 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.96■■□□□ 1.11
HIPK3Q9H422 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
HIPK3Q9H422 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.96■■□□□ 1.11
HIPK3Q9H422 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.96■■□□□ 1.11
HIPK3Q9H422 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.96■■□□□ 1.11
HIPK3Q9H422 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIPK3Q9H422 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIPK3Q9H422 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
HIPK3Q9H422 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
HIPK3Q9H422 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.95■■□□□ 1.1
HIPK3Q9H422 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.95■■□□□ 1.1
HIPK3Q9H422 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HIPK3Q9H422 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
HIPK3Q9H422 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.95■■□□□ 1.1
HIPK3Q9H422 AC010203.1-204ENST00000548782 407 ntBASIC21.95■■□□□ 1.1
HIPK3Q9H422 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.95■■□□□ 1.1
HIPK3Q9H422 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
HIPK3Q9H422 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.95■■□□□ 1.1
HIPK3Q9H422 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
HIPK3Q9H422 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.95■■□□□ 1.1
HIPK3Q9H422 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.95■■□□□ 1.1
HIPK3Q9H422 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
HIPK3Q9H422 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIPK3Q9H422 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIPK3Q9H422 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK3Q9H422 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.94■■□□□ 1.1
HIPK3Q9H422 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
HIPK3Q9H422 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK3Q9H422 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK3Q9H422 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK3Q9H422 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.94■■□□□ 1.1
HIPK3Q9H422 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.94■■□□□ 1.1
HIPK3Q9H422 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK3Q9H422 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.94■■□□□ 1.1
HIPK3Q9H422 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.94■■□□□ 1.1
HIPK3Q9H422 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.94■■□□□ 1.1
HIPK3Q9H422 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK3Q9H422 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK3Q9H422 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.94■■□□□ 1.1
HIPK3Q9H422 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.94■■□□□ 1.1
HIPK3Q9H422 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.94■■□□□ 1.1
HIPK3Q9H422 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.94■■□□□ 1.1
HIPK3Q9H422 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK3Q9H422 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK3Q9H422 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIPK3Q9H422 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIPK3Q9H422 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIPK3Q9H422 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIPK3Q9H422 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HIPK3Q9H422 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HIPK3Q9H422 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.93■■□□□ 1.1
HIPK3Q9H422 LIN28AP1-201ENST00000429574 405 ntBASIC21.93■■□□□ 1.1
HIPK3Q9H422 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.93■■□□□ 1.1
HIPK3Q9H422 GUSBP5-202ENST00000510805 1989 ntBASIC21.93■■□□□ 1.1
HIPK3Q9H422 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
HIPK3Q9H422 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.93■■□□□ 1.1
HIPK3Q9H422 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.93■■□□□ 1.1
HIPK3Q9H422 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HIPK3Q9H422 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms