Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 EIF2AK4-202ENST00000558557 2449 ntTSL 26.67□□□□□ -1.342e-10■■■■□ 22.8
XRN2Q9H0D6 EIF2AK4-203ENST00000558629 4374 ntTSL 1 (best)5.9□□□□□ -1.462e-10■■■■□ 22.8
XRN2Q9H0D6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.68□□□□□ -1.52e-10■■■■□ 22.8
XRN2Q9H0D6 EIF4B-211ENST00000551002 537 ntTSL 45.23□□□□□ -1.572e-24■■■■□ 22.8
XRN2Q9H0D6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.14□□□□□ -1.592e-10■■■■□ 22.8
XRN2Q9H0D6 MSL2-204ENST00000481989 576 ntTSL 42.61□□□□□ -1.999e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-215ENST00000556892 474 ntTSL 524.7■■□□□ 1.544e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.72■■□□□ 1.394e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.65■□□□□ 0.584e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.374e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.3■□□□□ 0.364e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.14■□□□□ 0.334e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.24■□□□□ 0.194e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.89■□□□□ 0.134e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-214ENST00000556702 520 ntTSL 214.72□□□□□ -0.054e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.49□□□□□ -0.094e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-209ENST00000554709 327 ntTSL 414.45□□□□□ -0.14e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-212ENST00000555932 1673 ntTSL 5 BASIC13.72□□□□□ -0.214e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-216ENST00000556979 615 ntTSL 3 BASIC13.35□□□□□ -0.274e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-206ENST00000394606 2097 ntTSL 1 (best)12.49□□□□□ -0.414e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-213ENST00000556443 585 ntTSL 2 BASIC12.4□□□□□ -0.424e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-202ENST00000284165 3155 ntTSL 1 (best) BASIC11.36□□□□□ -0.594e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-207ENST00000553928 623 ntTSL 1 (best)8.52□□□□□ -1.054e-6■■■■□ 22.8
XRN2Q9H0D6 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.68□□□□□ -1.54e-6■■■■□ 22.8
XRN2Q9H0D6 CAPN15-205ENST00000567216 3174 ntTSL 1 (best)19.52■□□□□ 0.725e-7■■■■□ 22.8
XRN2Q9H0D6 HERPUD1-205ENST00000562914 570 ntTSL 219.42■□□□□ 0.78e-7■■■■□ 22.8
XRN2Q9H0D6 HERPUD1-215ENST00000568676 571 ntTSL 219.42■□□□□ 0.78e-7■■■■□ 22.8
XRN2Q9H0D6 HERPUD1-219ENST00000570273 1425 ntTSL 1 (best)17.12■□□□□ 0.338e-7■■■■□ 22.8
XRN2Q9H0D6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.278e-7■■■■□ 22.8
XRN2Q9H0D6 HERPUD1-218ENST00000569569 1125 ntTSL 216.2■□□□□ 0.188e-7■■■■□ 22.8
XRN2Q9H0D6 HERPUD1-210ENST00000565966 798 ntTSL 516.2■□□□□ 0.188e-7■■■■□ 22.8
XRN2Q9H0D6 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC15.96■□□□□ 0.158e-7■■■■□ 22.8
XRN2Q9H0D6 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.7■□□□□ 0.18e-7■■■■□ 22.8
XRN2Q9H0D6 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.288e-7■■■■□ 22.8
XRN2Q9H0D6 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.05□□□□□ -1.282e-7■■■■□ 22.8
XRN2Q9H0D6 ANKRD11-206ENST00000562275 2762 ntTSL 513.75□□□□□ -0.211e-6■■■■□ 22.8
XRN2Q9H0D6 CRLF1-202ENST00000593286 514 ntTSL 417.17■□□□□ 0.343e-6■■■■□ 22.8
XRN2Q9H0D6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.565e-7■■■■□ 22.8
XRN2Q9H0D6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.046e-6■■■■□ 22.8
XRN2Q9H0D6 DNAJA1-203ENST00000495015 604 ntTSL 39.22□□□□□ -0.936e-6■■■■□ 22.8
XRN2Q9H0D6 NGDN-211ENST00000556699 725 ntTSL 26.12□□□□□ -1.437e-6■■■■□ 22.8
XRN2Q9H0D6 NCAPG2-201ENST00000356309 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.544e-8■■■■□ 22.7
XRN2Q9H0D6 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.764e-8■■■■□ 22.7
XRN2Q9H0D6 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.6□□□□□ -1.354e-8■■■■□ 22.7
XRN2Q9H0D6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.578e-7■■■■□ 22.7
XRN2Q9H0D6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.358e-7■■■■□ 22.7
XRN2Q9H0D6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.218e-7■■■■□ 22.7
XRN2Q9H0D6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.028e-7■■■■□ 22.7
XRN2Q9H0D6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.234e-6■■■■□ 22.7
XRN2Q9H0D6 SH3BP2-219ENST00000511237 517 ntTSL 519.73■□□□□ 0.751e-6■■■■□ 22.7
XRN2Q9H0D6 SH3BP2-215ENST00000510074 649 ntTSL 519.73■□□□□ 0.751e-6■■■■□ 22.7
XRN2Q9H0D6 GRINA-205ENST00000529301 1075 ntTSL 323.52■■□□□ 1.365e-6■■■■□ 22.7
XRN2Q9H0D6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.225e-6■■■■□ 22.7
XRN2Q9H0D6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.975e-6■■■■□ 22.7
XRN2Q9H0D6 SH3BP4-204ENST00000416021 593 ntTSL 324.76■■□□□ 1.551e-6■■■■□ 22.7
XRN2Q9H0D6 RPS18-236ENST00000490191 996 ntTSL 219.9■□□□□ 0.781e-19■■■■□ 22.7
XRN2Q9H0D6 RPS18-235ENST00000479802 413 ntTSL 214.03□□□□□ -0.161e-19■■■■□ 22.7
XRN2Q9H0D6 RPS18-233ENST00000474973 589 ntTSL 2 BASIC14.03□□□□□ -0.161e-19■■■■□ 22.7
XRN2Q9H0D6 RPS18-234ENST00000476222 685 ntTSL 1 (best)14.03□□□□□ -0.161e-19■■■■□ 22.7
XRN2Q9H0D6 RPS18-230ENST00000439602 613 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.161e-19■■■■□ 22.7
XRN2Q9H0D6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.255e-6■■■■□ 22.7
XRN2Q9H0D6 RPS18-231ENST00000472218 1109 ntTSL 211.74□□□□□ -0.531e-19■■■■□ 22.7
XRN2Q9H0D6 RPS18-232ENST00000474626 639 ntTSL 311.2□□□□□ -0.621e-19■■■■□ 22.7
XRN2Q9H0D6 RPS18-237ENST00000496813 642 ntTSL 211.2□□□□□ -0.621e-19■■■■□ 22.7
XRN2Q9H0D6 CLUH-210ENST00000574426 3844 ntAPPRIS ALT2 TSL 515.18■□□□□ 0.025e-7■■■■□ 22.7
XRN2Q9H0D6 PIM3-202ENST00000467480 723 ntTSL 237.56■■■■□ 3.63e-23■■■■□ 22.7
XRN2Q9H0D6 TNFRSF10B-207ENST00000523504 1464 ntTSL 224.37■■□□□ 1.494e-7■■■■□ 22.7
XRN2Q9H0D6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.374e-7■■■■□ 22.7
XRN2Q9H0D6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.88■□□□□ 0.932e-10■■■■□ 22.7
XRN2Q9H0D6 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC14.87□□□□□ -0.032e-6■■■■□ 22.7
XRN2Q9H0D6 TNFRSF10B-201ENST00000276431 4146 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.654e-7■■■■□ 22.7
XRN2Q9H0D6 EZH1-215ENST00000588897 2283 ntTSL 210.4□□□□□ -0.742e-10■■■■□ 22.7
XRN2Q9H0D6 EZH1-204ENST00000585550 1643 ntTSL 1 (best)9.96□□□□□ -0.822e-10■■■■□ 22.7
XRN2Q9H0D6 EZH1-205ENST00000585893 2394 ntTSL 2 BASIC9.82□□□□□ -0.842e-10■■■■□ 22.7
XRN2Q9H0D6 EZH1-217ENST00000590078 2392 ntTSL 2 BASIC9.82□□□□□ -0.842e-10■■■■□ 22.7
XRN2Q9H0D6 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.58□□□□□ -1.042e-10■■■■□ 22.7
XRN2Q9H0D6 EZH1-220ENST00000591330 2387 ntTSL 1 (best)8.57□□□□□ -1.042e-10■■■■□ 22.7
XRN2Q9H0D6 EZH1-208ENST00000586103 2752 ntTSL 58.47□□□□□ -1.052e-10■■■■□ 22.7
XRN2Q9H0D6 EZH1-206ENST00000585912 2295 ntTSL 1 (best)7.75□□□□□ -1.172e-10■■■■□ 22.7
XRN2Q9H0D6 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.232e-10■■■■□ 22.7
XRN2Q9H0D6 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.252e-10■■■■□ 22.7
XRN2Q9H0D6 EEF1D-234ENST00000530616 749 ntTSL 316.12■□□□□ 0.179e-7■■■■□ 22.7
XRN2Q9H0D6 EEF1D-210ENST00000525223 610 ntTSL 315.62■□□□□ 0.099e-7■■■■□ 22.7
XRN2Q9H0D6 RNU6-6P-201ENST00000606623 107 ntBASIC3.04□□□□□ -1.929e-21■■■■□ 22.7
XRN2Q9H0D6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.63■□□□□ 0.091e-8■■■■□ 22.7
XRN2Q9H0D6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.041e-8■■■■□ 22.7
XRN2Q9H0D6 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.184e-6■■■■□ 22.7
XRN2Q9H0D6 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.241e-8■■■■□ 22.7
XRN2Q9H0D6 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.924e-6■■■■□ 22.7
XRN2Q9H0D6 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.263e-6■■■■□ 22.6
XRN2Q9H0D6 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.283e-6■■■■□ 22.6
XRN2Q9H0D6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.59■■□□□ 1.214e-6■■■■□ 22.6
XRN2Q9H0D6 RPH3AL-221ENST00000577079 814 ntAPPRIS ALT2 TSL 319.79■□□□□ 0.764e-6■■■■□ 22.6
XRN2Q9H0D6 RPH3AL-218ENST00000575736 566 ntTSL 519.14■□□□□ 0.654e-6■■■■□ 22.6
XRN2Q9H0D6 RPH3AL-220ENST00000576420 820 ntAPPRIS ALT2 TSL 318.81■□□□□ 0.64e-6■■■■□ 22.6
XRN2Q9H0D6 RPH3AL-215ENST00000574953 692 ntAPPRIS ALT2 TSL 518.33■□□□□ 0.524e-6■■■■□ 22.6
XRN2Q9H0D6 RPH3AL-214ENST00000574722 586 ntTSL 418.11■□□□□ 0.494e-6■■■■□ 22.6
XRN2Q9H0D6 RPH3AL-204ENST00000570638 537 ntTSL 518.11■□□□□ 0.494e-6■■■■□ 22.6
XRN2Q9H0D6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.76■□□□□ 0.436e-6■■■■□ 22.6
XRN2Q9H0D6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.274e-6■■■■□ 22.6
Retrieved 100 of 21,068 protein–RNA pairs in 123.3 ms