Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF2Q99805 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF2Q99805 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.51■□□□□ 0.55
TM9SF2Q99805 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF2Q99805 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM9SF2Q99805 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.51■□□□□ 0.55
TM9SF2Q99805 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.51■□□□□ 0.55
TM9SF2Q99805 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
TM9SF2Q99805 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.5■□□□□ 0.55
TM9SF2Q99805 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
TM9SF2Q99805 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF2Q99805 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF2Q99805 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TM9SF2Q99805 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TM9SF2Q99805 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
TM9SF2Q99805 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF2Q99805 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.5■□□□□ 0.55
TM9SF2Q99805 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF2Q99805 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF2Q99805 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.5■□□□□ 0.55
TM9SF2Q99805 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.5■□□□□ 0.55
TM9SF2Q99805 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.5■□□□□ 0.55
TM9SF2Q99805 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF2Q99805 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF2Q99805 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TM9SF2Q99805 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM9SF2Q99805 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF2Q99805 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF2Q99805 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.49■□□□□ 0.55
TM9SF2Q99805 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.49■□□□□ 0.55
TM9SF2Q99805 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.49■□□□□ 0.55
TM9SF2Q99805 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.49■□□□□ 0.55
TM9SF2Q99805 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.49■□□□□ 0.55
TM9SF2Q99805 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF2Q99805 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.49■□□□□ 0.55
TM9SF2Q99805 AC100791.3-201ENST00000617619 330 ntBASIC18.49■□□□□ 0.55
TM9SF2Q99805 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF2Q99805 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.49■□□□□ 0.55
TM9SF2Q99805 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF2Q99805 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF2Q99805 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.49■□□□□ 0.55
TM9SF2Q99805 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF2Q99805 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF2Q99805 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
TM9SF2Q99805 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF2Q99805 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF2Q99805 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.49■□□□□ 0.55
TM9SF2Q99805 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM9SF2Q99805 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF2Q99805 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF2Q99805 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF2Q99805 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF2Q99805 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF2Q99805 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF2Q99805 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 AC007225.1-201ENST00000566331 1836 ntBASIC18.48■□□□□ 0.55
TM9SF2Q99805 AC121338.2-201ENST00000622535 1744 ntBASIC18.48■□□□□ 0.55
TM9SF2Q99805 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF2Q99805 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TM9SF2Q99805 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM9SF2Q99805 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TM9SF2Q99805 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.47■□□□□ 0.55
TM9SF2Q99805 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.47■□□□□ 0.55
TM9SF2Q99805 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TM9SF2Q99805 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.47■□□□□ 0.55
TM9SF2Q99805 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.47■□□□□ 0.55
TM9SF2Q99805 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.47■□□□□ 0.55
TM9SF2Q99805 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 AC097658.1-201ENST00000475555 843 ntBASIC18.47■□□□□ 0.55
TM9SF2Q99805 AC098934.4-201ENST00000564127 592 ntBASIC18.47■□□□□ 0.55
TM9SF2Q99805 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM9SF2Q99805 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.47■□□□□ 0.55
TM9SF2Q99805 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.47■□□□□ 0.55
TM9SF2Q99805 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF2Q99805 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF2Q99805 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM9SF2Q99805 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.46■□□□□ 0.55
TM9SF2Q99805 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms