Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
NPAS1Q99742 PCDHAC2-203ENST00000615316 3011 ntBASIC18.24■□□□□ 0.51
NPAS1Q99742 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS1Q99742 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS1Q99742 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS1Q99742 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS1Q99742 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.24■□□□□ 0.51
NPAS1Q99742 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.24■□□□□ 0.51
NPAS1Q99742 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.24■□□□□ 0.51
NPAS1Q99742 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS1Q99742 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NPAS1Q99742 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.23■□□□□ 0.51
NPAS1Q99742 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.23■□□□□ 0.51
NPAS1Q99742 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.23■□□□□ 0.51
NPAS1Q99742 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.23■□□□□ 0.51
NPAS1Q99742 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NPAS1Q99742 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.23■□□□□ 0.51
NPAS1Q99742 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 KRT18P6-201ENST00000555540 1265 ntBASIC18.23■□□□□ 0.51
NPAS1Q99742 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.23■□□□□ 0.51
NPAS1Q99742 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NPAS1Q99742 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
NPAS1Q99742 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 LINC01521-201ENST00000504184 1943 ntBASIC18.23■□□□□ 0.51
NPAS1Q99742 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS1Q99742 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.22■□□□□ 0.51
NPAS1Q99742 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NPAS1Q99742 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
NPAS1Q99742 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.22■□□□□ 0.51
NPAS1Q99742 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.22■□□□□ 0.51
NPAS1Q99742 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPAS1Q99742 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS1Q99742 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.21■□□□□ 0.51
NPAS1Q99742 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS1Q99742 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS1Q99742 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.21■□□□□ 0.51
NPAS1Q99742 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS1Q99742 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS1Q99742 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS1Q99742 RNA5SP413-201ENST00000516373 109 ntBASIC18.21■□□□□ 0.51
NPAS1Q99742 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS1Q99742 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NPAS1Q99742 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS1Q99742 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS1Q99742 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.21■□□□□ 0.51
NPAS1Q99742 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS1Q99742 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.21■□□□□ 0.51
NPAS1Q99742 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NPAS1Q99742 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPAS1Q99742 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.21■□□□□ 0.51
NPAS1Q99742 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.21■□□□□ 0.51
NPAS1Q99742 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NPAS1Q99742 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.21■□□□□ 0.5
NPAS1Q99742 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS1Q99742 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NPAS1Q99742 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NPAS1Q99742 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS1Q99742 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS1Q99742 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS1Q99742 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS1Q99742 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NPAS1Q99742 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NPAS1Q99742 AC099778.1-201ENST00000568593 1911 ntBASIC18.2■□□□□ 0.5
NPAS1Q99742 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS1Q99742 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS1Q99742 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS1Q99742 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.2■□□□□ 0.5
NPAS1Q99742 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NPAS1Q99742 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.2■□□□□ 0.5
NPAS1Q99742 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NPAS1Q99742 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS1Q99742 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS1Q99742 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms