Protein–RNA interactions for Protein: Q96QF7

GCNA, Acidic repeat-containing protein, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNAQ96QF7 AC026310.3-201ENST00000625186 2373 ntBASIC21.11■□□□□ 0.97
GCNAQ96QF7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
GCNAQ96QF7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.11■□□□□ 0.97
GCNAQ96QF7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.11■□□□□ 0.97
GCNAQ96QF7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GCNAQ96QF7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.11■□□□□ 0.97
GCNAQ96QF7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GCNAQ96QF7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GCNAQ96QF7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GCNAQ96QF7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GCNAQ96QF7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.1■□□□□ 0.97
GCNAQ96QF7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GCNAQ96QF7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GCNAQ96QF7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
GCNAQ96QF7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GCNAQ96QF7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GCNAQ96QF7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
GCNAQ96QF7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.1■□□□□ 0.97
GCNAQ96QF7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.1■□□□□ 0.97
GCNAQ96QF7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.1■□□□□ 0.97
GCNAQ96QF7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GCNAQ96QF7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GCNAQ96QF7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
GCNAQ96QF7 AC133681.1-201ENST00000465482 601 ntBASIC21.1■□□□□ 0.97
GCNAQ96QF7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
GCNAQ96QF7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
GCNAQ96QF7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.1■□□□□ 0.97
GCNAQ96QF7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
GCNAQ96QF7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GCNAQ96QF7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.09■□□□□ 0.97
GCNAQ96QF7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GCNAQ96QF7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GCNAQ96QF7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.09■□□□□ 0.97
GCNAQ96QF7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GCNAQ96QF7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
GCNAQ96QF7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.09■□□□□ 0.97
GCNAQ96QF7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GCNAQ96QF7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.09■□□□□ 0.97
GCNAQ96QF7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.09■□□□□ 0.97
GCNAQ96QF7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.09■□□□□ 0.97
GCNAQ96QF7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.09■□□□□ 0.97
GCNAQ96QF7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.09■□□□□ 0.97
GCNAQ96QF7 MIR4497-201ENST00000583208 89 ntBASIC21.09■□□□□ 0.97
GCNAQ96QF7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
GCNAQ96QF7 AC110285.5-201ENST00000611501 352 ntBASIC21.09■□□□□ 0.97
GCNAQ96QF7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GCNAQ96QF7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GCNAQ96QF7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
GCNAQ96QF7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.09■□□□□ 0.97
GCNAQ96QF7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GCNAQ96QF7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GCNAQ96QF7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.08■□□□□ 0.97
GCNAQ96QF7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GCNAQ96QF7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
GCNAQ96QF7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.08■□□□□ 0.97
GCNAQ96QF7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.08■□□□□ 0.97
GCNAQ96QF7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.08■□□□□ 0.97
GCNAQ96QF7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.08■□□□□ 0.97
GCNAQ96QF7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.08■□□□□ 0.97
GCNAQ96QF7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.08■□□□□ 0.97
GCNAQ96QF7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.08■□□□□ 0.97
GCNAQ96QF7 Z99916.2-201ENST00000604037 246 ntBASIC21.08■□□□□ 0.97
GCNAQ96QF7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GCNAQ96QF7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
GCNAQ96QF7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.08■□□□□ 0.96
GCNAQ96QF7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.08■□□□□ 0.96
GCNAQ96QF7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.08■□□□□ 0.96
GCNAQ96QF7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.08■□□□□ 0.96
GCNAQ96QF7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
GCNAQ96QF7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
GCNAQ96QF7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
GCNAQ96QF7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
GCNAQ96QF7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
GCNAQ96QF7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
GCNAQ96QF7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.07■□□□□ 0.96
GCNAQ96QF7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.07■□□□□ 0.96
GCNAQ96QF7 AC012618.2-201ENST00000428058 849 ntBASIC21.07■□□□□ 0.96
GCNAQ96QF7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.07■□□□□ 0.96
GCNAQ96QF7 SNORA78-201ENST00000459373 127 ntBASIC21.07■□□□□ 0.96
GCNAQ96QF7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.07■□□□□ 0.96
GCNAQ96QF7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.07■□□□□ 0.96
GCNAQ96QF7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
GCNAQ96QF7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GCNAQ96QF7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.07■□□□□ 0.96
GCNAQ96QF7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
GCNAQ96QF7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.06■□□□□ 0.96
GCNAQ96QF7 AL135905.2-201ENST00000584934 1404 ntBASIC21.06■□□□□ 0.96
GCNAQ96QF7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms