Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 AC010203.1-204ENST00000548782 407 ntBASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 LINC01238-205ENST00000567549 1107 ntBASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 DGCR10-201ENST00000609839 495 ntBASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NECTIN4Q96NY8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.8■□□□□ 0.92
NECTIN4Q96NY8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 AC128688.1-201ENST00000487626 519 ntBASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 WWOX-216ENST00000569818 525 ntBASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NECTIN4Q96NY8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 TSPY14P-201ENST00000303979 915 ntBASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 AL445675.2-201ENST00000620291 557 ntBASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 AC006011.2-201ENST00000621313 1158 ntBASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 KRT8P20-201ENST00000423953 1409 ntBASIC20.78■□□□□ 0.92
NECTIN4Q96NY8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms