Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 AC126544.1-201ENST00000580842 1059 ntBASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 AL049812.1-201ENST00000432563 2267 ntBASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP6Q96FZ7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 AC008764.7-201ENST00000593779 1081 ntBASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP6Q96FZ7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 BX842568.3-201ENST00000418104 571 ntBASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 MIR2861-201ENST00000636310 90 ntBASIC20.08■□□□□ 0.81
CHMP6Q96FZ7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CHMP6Q96FZ7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CHMP6Q96FZ7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.08■□□□□ 0.8
CHMP6Q96FZ7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMP6Q96FZ7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.08■□□□□ 0.8
CHMP6Q96FZ7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMP6Q96FZ7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.08■□□□□ 0.8
CHMP6Q96FZ7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 AP004607.4-201ENST00000530158 1459 ntBASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 AC233992.3-201ENST00000607491 485 ntBASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 LINC01465-201ENST00000408887 1940 ntBASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP6Q96FZ7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms