Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHCHD1Q96BP2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CHCHD1Q96BP2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CHCHD1Q96BP2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHCHD1Q96BP2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CHCHD1Q96BP2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.6□□□□□ -0.07
CHCHD1Q96BP2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHCHD1Q96BP2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHCHD1Q96BP2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 AC018470.1-201ENST00000624790 3129 ntBASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 AC129492.7-201ENST00000622992 756 ntBASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHCHD1Q96BP2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHCHD1Q96BP2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.58□□□□□ -0.07
CHCHD1Q96BP2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
CHCHD1Q96BP2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHCHD1Q96BP2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CHCHD1Q96BP2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHCHD1Q96BP2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CHCHD1Q96BP2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHCHD1Q96BP2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 MIR639-201ENST00000384974 98 ntBASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 AC009113.1-201ENST00000570267 2443 ntBASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 NOC2LP2-201ENST00000407594 1944 ntBASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 AC055733.4-201ENST00000638462 1354 ntBASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHCHD1Q96BP2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 ABHD17AP4-201ENST00000411545 909 ntBASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CHCHD1Q96BP2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHCHD1Q96BP2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms