Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 KRT18P68-201ENST00000392293 1000 ntBASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAF3IP1Q8TDR0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 AC105020.6-201ENST00000621523 1217 ntBASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 OR10C1-204ENST00000622521 1039 ntBASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAF3IP1Q8TDR0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 CYP2T3P-201ENST00000601990 817 ntBASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 AC005181.1-201ENST00000604782 1256 ntBASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 AL137784.2-201ENST00000607332 1000 ntBASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP1Q8TDR0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.83■□□□□ 0.92
TRAF3IP1Q8TDR0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAF3IP1Q8TDR0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.83■□□□□ 0.92
TRAF3IP1Q8TDR0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.83■□□□□ 0.92
TRAF3IP1Q8TDR0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRAF3IP1Q8TDR0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAF3IP1Q8TDR0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRAF3IP1Q8TDR0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAF3IP1Q8TDR0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAF3IP1Q8TDR0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 AC004911.1-201ENST00000416316 871 ntBASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 AC080038.1-201ENST00000611274 1154 ntBASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAF3IP1Q8TDR0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 IKBKGP1-201ENST00000612193 1073 ntBASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms