Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 AC006058.3-201ENST00000606217 1069 ntBASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCDH20Q8N6Y1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH20Q8N6Y1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH20Q8N6Y1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 AC128676.1-201ENST00000454392 318 ntBASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 AC008687.6-201ENST00000596318 630 ntBASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH20Q8N6Y1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 KRT17P3-201ENST00000420566 1262 ntBASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH20Q8N6Y1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms