Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.85■□□□□ 0.77
NUDCD3Q8IVD9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 IRS3P-201ENST00000223076 1006 ntBASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 AC091799.1-201ENST00000422823 811 ntBASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 FAM21FP-204ENST00000608637 956 ntBASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD3Q8IVD9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 AL031432.3-201ENST00000607698 485 ntBASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.83■□□□□ 0.77
NUDCD3Q8IVD9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NUDCD3Q8IVD9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.83■□□□□ 0.76
NUDCD3Q8IVD9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NUDCD3Q8IVD9 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.83■□□□□ 0.76
NUDCD3Q8IVD9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.83■□□□□ 0.76
NUDCD3Q8IVD9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.83■□□□□ 0.76
NUDCD3Q8IVD9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
NUDCD3Q8IVD9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NUDCD3Q8IVD9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 AP001160.3-201ENST00000601484 763 ntBASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 AC104187.1-201ENST00000607510 612 ntBASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD3Q8IVD9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NUDCD3Q8IVD9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms