Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 KRT16P1-201ENST00000399124 1418 ntBASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPAS4Q8IUM7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 KRT8P17-201ENST00000453110 1448 ntBASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 EP400NL-214ENST00000641289 2402 ntBASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 AL445228.2-201ENST00000605589 952 ntBASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPAS4Q8IUM7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPAS4Q8IUM7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 LINC01568-207ENST00000641790 1380 ntBASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 FITM1-202ENST00000559294 800 ntBASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 AC012676.1-201ENST00000574705 1949 ntBASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NPAS4Q8IUM7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 AL121603.2-201ENST00000557373 2117 ntBASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 NAPSB-206ENST00000562112 1266 ntBASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.52■■□□□ 1.04
NPAS4Q8IUM7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms