Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 KRT18P57-201ENST00000443599 1254 ntBASIC21.24■□□□□ 0.99
RNF135Q8IUD6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 AC005829.2-201ENST00000571422 1056 ntBASIC21.24■□□□□ 0.99
RNF135Q8IUD6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF135Q8IUD6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF135Q8IUD6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 AC005229.4-201ENST00000610085 2198 ntBASIC21.22■□□□□ 0.99
RNF135Q8IUD6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 AC113347.1-201ENST00000413321 391 ntBASIC21.22■□□□□ 0.99
RNF135Q8IUD6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF135Q8IUD6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF135Q8IUD6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RNF135Q8IUD6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF135Q8IUD6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF135Q8IUD6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF135Q8IUD6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF135Q8IUD6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF135Q8IUD6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.21■□□□□ 0.99
RNF135Q8IUD6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.21■□□□□ 0.99
RNF135Q8IUD6 AF186192.3-201ENST00000583427 947 ntBASIC21.21■□□□□ 0.99
RNF135Q8IUD6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RNF135Q8IUD6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF135Q8IUD6 KRT8P9-201ENST00000558927 1449 ntBASIC21.21■□□□□ 0.99
RNF135Q8IUD6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 AF106564.1-201ENST00000607058 2553 ntBASIC21.2■□□□□ 0.98
RNF135Q8IUD6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 NTF6B-201ENST00000591913 560 ntBASIC21.2■□□□□ 0.98
RNF135Q8IUD6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF135Q8IUD6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF135Q8IUD6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms