Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CROCCP2Q86T23 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CROCCP2Q86T23 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.29■□□□□ 0.84
CROCCP2Q86T23 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 AC079598.2-202ENST00000546624 1451 ntBASIC20.29■□□□□ 0.84
CROCCP2Q86T23 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.29■□□□□ 0.84
CROCCP2Q86T23 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 MIR4466-201ENST00000606121 54 ntBASIC20.28■□□□□ 0.84
CROCCP2Q86T23 FAM21FP-204ENST00000608637 956 ntBASIC20.28■□□□□ 0.84
CROCCP2Q86T23 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CROCCP2Q86T23 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 MIR4767-201ENST00000582827 78 ntBASIC20.27■□□□□ 0.84
CROCCP2Q86T23 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.27■□□□□ 0.84
CROCCP2Q86T23 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CROCCP2Q86T23 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CROCCP2Q86T23 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CROCCP2Q86T23 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CROCCP2Q86T23 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CROCCP2Q86T23 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CROCCP2Q86T23 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.26■□□□□ 0.83
CROCCP2Q86T23 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CROCCP2Q86T23 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.26■□□□□ 0.83
CROCCP2Q86T23 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CROCCP2Q86T23 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms