Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC026396.1-201ENST00000419388 421 ntBASIC16.8■□□□□ 0.28
VPS13CQ709C8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13CQ709C8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS13CQ709C8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS13CQ709C8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS13CQ709C8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VPS13CQ709C8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.8■□□□□ 0.28
VPS13CQ709C8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13CQ709C8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VPS13CQ709C8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
VPS13CQ709C8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13CQ709C8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13CQ709C8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
VPS13CQ709C8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
VPS13CQ709C8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13CQ709C8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13CQ709C8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13CQ709C8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS13CQ709C8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS13CQ709C8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS13CQ709C8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VPS13CQ709C8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS13CQ709C8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS13CQ709C8 TSPY14P-201ENST00000303979 915 ntBASIC16.79■□□□□ 0.28
VPS13CQ709C8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS13CQ709C8 MESTP1-201ENST00000404287 994 ntBASIC16.79■□□□□ 0.28
VPS13CQ709C8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS13CQ709C8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS13CQ709C8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS13CQ709C8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS13CQ709C8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VPS13CQ709C8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS13CQ709C8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VPS13CQ709C8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
VPS13CQ709C8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VPS13CQ709C8 KRT18P48-201ENST00000434763 852 ntBASIC16.79■□□□□ 0.28
VPS13CQ709C8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS13CQ709C8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13CQ709C8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS13CQ709C8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS13CQ709C8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13CQ709C8 AC010203.1-204ENST00000548782 407 ntBASIC16.78■□□□□ 0.28
VPS13CQ709C8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13CQ709C8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13CQ709C8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13CQ709C8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13CQ709C8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS13CQ709C8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13CQ709C8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13CQ709C8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13CQ709C8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13CQ709C8 GUSBP5-202ENST00000510805 1989 ntBASIC16.78■□□□□ 0.28
VPS13CQ709C8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13CQ709C8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
VPS13CQ709C8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13CQ709C8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VPS13CQ709C8 AL024507.2-201ENST00000606070 2574 ntBASIC16.77■□□□□ 0.28
VPS13CQ709C8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.77■□□□□ 0.28
VPS13CQ709C8 NIFKP9-201ENST00000419265 221 ntBASIC16.77■□□□□ 0.28
VPS13CQ709C8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.77■□□□□ 0.28
VPS13CQ709C8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.77■□□□□ 0.28
VPS13CQ709C8 AC026271.3-201ENST00000571884 352 ntBASIC16.77■□□□□ 0.28
VPS13CQ709C8 AL121829.2-201ENST00000620908 328 ntBASIC16.77■□□□□ 0.28
VPS13CQ709C8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS13CQ709C8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.77■□□□□ 0.28
VPS13CQ709C8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS13CQ709C8 BX664615.1-201ENST00000443558 458 ntBASIC16.77■□□□□ 0.28
VPS13CQ709C8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.77■□□□□ 0.28
VPS13CQ709C8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VPS13CQ709C8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS13CQ709C8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
VPS13CQ709C8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS13CQ709C8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS13CQ709C8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
VPS13CQ709C8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS13CQ709C8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.77■□□□□ 0.27
VPS13CQ709C8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS13CQ709C8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VPS13CQ709C8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13CQ709C8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13CQ709C8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13CQ709C8 FBXW4P1-201ENST00000426721 2239 ntBASIC16.76■□□□□ 0.27
VPS13CQ709C8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
VPS13CQ709C8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.76■□□□□ 0.27
VPS13CQ709C8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13CQ709C8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13CQ709C8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.76■□□□□ 0.27
VPS13CQ709C8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13CQ709C8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13CQ709C8 AF106564.1-201ENST00000607058 2553 ntBASIC16.76■□□□□ 0.27
VPS13CQ709C8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13CQ709C8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13CQ709C8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13CQ709C8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS13CQ709C8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13CQ709C8 FAM8A6P-201ENST00000407496 1135 ntBASIC16.76■□□□□ 0.27
VPS13CQ709C8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13CQ709C8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VPS13CQ709C8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms