Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.74■□□□□ 0.59
RTL4Q6ZR62 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 TSPY20P-201ENST00000450910 630 ntBASIC18.73■□□□□ 0.59
RTL4Q6ZR62 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RTL4Q6ZR62 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 FAM201B-201ENST00000458407 597 ntBASIC18.72■□□□□ 0.59
RTL4Q6ZR62 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 MIR4651-201ENST00000582622 73 ntBASIC18.72■□□□□ 0.59
RTL4Q6ZR62 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTL4Q6ZR62 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 AC007952.6-201ENST00000573168 2673 ntBASIC18.71■□□□□ 0.59
RTL4Q6ZR62 AC003957.1-201ENST00000625108 2673 ntBASIC18.71■□□□□ 0.59
RTL4Q6ZR62 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL4Q6ZR62 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 C2orf69P4-201ENST00000565394 541 ntBASIC18.7■□□□□ 0.58
RTL4Q6ZR62 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 HLA-B-256ENST00000639848 1089 ntBASIC18.7■□□□□ 0.58
RTL4Q6ZR62 AC027702.1-201ENST00000563810 1770 ntBASIC18.7■□□□□ 0.58
RTL4Q6ZR62 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms