Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
LINC00575Q6W349 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC00575Q6W349 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC12.68□□□□□ -0.38
LINC00575Q6W349 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00575Q6W349 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00575Q6W349 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 AC012354.3-201ENST00000623734 483 ntBASIC12.68□□□□□ -0.38
LINC00575Q6W349 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LINC00575Q6W349 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
LINC00575Q6W349 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 PWWP2AP1-201ENST00000429776 2273 ntBASIC12.68□□□□□ -0.38
LINC00575Q6W349 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00575Q6W349 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00575Q6W349 BX119927.1-201ENST00000636596 1552 ntBASIC12.68□□□□□ -0.38
LINC00575Q6W349 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00575Q6W349 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 CD37-204ENST00000535669 1674 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 AC079598.2-202ENST00000546624 1451 ntBASIC12.67□□□□□ -0.38
LINC00575Q6W349 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 SLC47A1P1-202ENST00000449666 945 ntBASIC12.67□□□□□ -0.38
LINC00575Q6W349 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00575Q6W349 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00575Q6W349 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 AR-207ENST00000612010 3896 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 SRD5A1P1-201ENST00000442297 786 ntBASIC12.66□□□□□ -0.38
LINC00575Q6W349 AC239859.2-201ENST00000444165 318 ntBASIC12.66□□□□□ -0.38
LINC00575Q6W349 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 AL138724.1-201ENST00000606771 1088 ntBASIC12.66□□□□□ -0.38
LINC00575Q6W349 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00575Q6W349 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00575Q6W349 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms