Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF220Q5VTB9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF220Q5VTB9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 AL133373.2-201ENST00000623187 2828 ntBASIC19.2■□□□□ 0.66
RNF220Q5VTB9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF220Q5VTB9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 PCDHB18P-201ENST00000524813 2368 ntBASIC19.19■□□□□ 0.66
RNF220Q5VTB9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 AP004607.4-201ENST00000530158 1459 ntBASIC19.19■□□□□ 0.66
RNF220Q5VTB9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 AL032819.2-201ENST00000624543 2162 ntBASIC19.19■□□□□ 0.66
RNF220Q5VTB9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF220Q5VTB9 LINC02228-203ENST00000641970 1355 ntBASIC19.19■□□□□ 0.66
RNF220Q5VTB9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 TCF3P1-201ENST00000423021 1937 ntBASIC19.18■□□□□ 0.66
RNF220Q5VTB9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 POU5F1P4-201ENST00000413175 1085 ntBASIC19.18■□□□□ 0.66
RNF220Q5VTB9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RNF220Q5VTB9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF220Q5VTB9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF220Q5VTB9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RNF220Q5VTB9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF220Q5VTB9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms