Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 AP000974.1-201ENST00000623909 2387 ntBASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.89■□□□□ 0.61
RUNDC3AQ59EK9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RUNDC3AQ59EK9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 KRT19P1-201ENST00000405746 1186 ntBASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 UBE2DNL-204ENST00000602536 740 ntBASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 AC009237.14-201ENST00000609975 1594 ntBASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RUNDC3AQ59EK9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 CYP21A1P-202ENST00000354927 1481 ntBASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 KRT18P61-201ENST00000585825 1298 ntBASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RUNDC3AQ59EK9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms