Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AC068338.2-201ENST00000563278 1430 ntBASIC17.47■□□□□ 0.39
CHRFAM7AQ494W8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHRFAM7AQ494W8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 AC097658.1-201ENST00000475555 843 ntBASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRFAM7AQ494W8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.38
CHRFAM7AQ494W8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CHRFAM7AQ494W8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHRFAM7AQ494W8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 AFG3L1P-217ENST00000557444 2447 ntBASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 AC006058.3-201ENST00000606217 1069 ntBASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRFAM7AQ494W8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 AL512625.2-201ENST00000417533 625 ntBASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 AL596275.1-201ENST00000423464 877 ntBASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRFAM7AQ494W8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 BX276092.2-201ENST00000417668 665 ntBASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 AC007322.4-201ENST00000509611 723 ntBASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRFAM7AQ494W8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms