Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
H3F3AP84243 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.92■□□□□ 0.46
H3F3AP84243 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
H3F3AP84243 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H3F3AP84243 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
H3F3AP84243 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
H3F3AP84243 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.91■□□□□ 0.46
H3F3AP84243 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
H3F3AP84243 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.91■□□□□ 0.46
H3F3AP84243 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.91■□□□□ 0.46
H3F3AP84243 HLA-G-202ENST00000376815 851 ntBASIC17.91■□□□□ 0.46
H3F3AP84243 HLA-G-203ENST00000376818 1127 ntBASIC17.91■□□□□ 0.46
H3F3AP84243 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.91■□□□□ 0.46
H3F3AP84243 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.91■□□□□ 0.46
H3F3AP84243 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.91■□□□□ 0.46
H3F3AP84243 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
H3F3AP84243 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.91■□□□□ 0.46
H3F3AP84243 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.91■□□□□ 0.46
H3F3AP84243 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.91■□□□□ 0.46
H3F3AP84243 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.91■□□□□ 0.46
H3F3AP84243 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.91■□□□□ 0.46
H3F3AP84243 AC099778.1-201ENST00000568593 1911 ntBASIC17.91■□□□□ 0.46
H3F3AP84243 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
H3F3AP84243 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.91■□□□□ 0.46
H3F3AP84243 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.91■□□□□ 0.46
H3F3AP84243 BX119927.1-201ENST00000636596 1552 ntBASIC17.91■□□□□ 0.46
H3F3AP84243 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3F3AP84243 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.9■□□□□ 0.46
H3F3AP84243 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.9■□□□□ 0.46
H3F3AP84243 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
H3F3AP84243 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
H3F3AP84243 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.9■□□□□ 0.46
H3F3AP84243 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.9■□□□□ 0.46
H3F3AP84243 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
H3F3AP84243 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
H3F3AP84243 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.9■□□□□ 0.46
H3F3AP84243 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
H3F3AP84243 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.9■□□□□ 0.46
H3F3AP84243 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
H3F3AP84243 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
H3F3AP84243 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3F3AP84243 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
H3F3AP84243 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.89■□□□□ 0.46
H3F3AP84243 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
H3F3AP84243 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
H3F3AP84243 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.89■□□□□ 0.45
H3F3AP84243 AC092368.3-202ENST00000574180 1591 ntBASIC17.89■□□□□ 0.45
H3F3AP84243 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
H3F3AP84243 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.89■□□□□ 0.45
H3F3AP84243 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
H3F3AP84243 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.89■□□□□ 0.45
H3F3AP84243 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.89■□□□□ 0.45
H3F3AP84243 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.89■□□□□ 0.45
H3F3AP84243 PNMA6B-201ENST00000538162 1200 ntBASIC17.89■□□□□ 0.45
H3F3AP84243 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
H3F3AP84243 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
H3F3AP84243 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.89■□□□□ 0.45
H3F3AP84243 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.89■□□□□ 0.45
H3F3AP84243 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.89■□□□□ 0.45
H3F3AP84243 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H3F3AP84243 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms