Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
NCKAP1LP55160 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NCKAP1LP55160 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCKAP1LP55160 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NCKAP1LP55160 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
NCKAP1LP55160 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NCKAP1LP55160 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NCKAP1LP55160 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.98■■□□□ 1.11
NCKAP1LP55160 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.98■■□□□ 1.11
NCKAP1LP55160 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.98■■□□□ 1.11
NCKAP1LP55160 AC008687.6-201ENST00000596318 630 ntBASIC21.98■■□□□ 1.11
NCKAP1LP55160 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.98■■□□□ 1.11
NCKAP1LP55160 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
NCKAP1LP55160 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCKAP1LP55160 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCKAP1LP55160 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NCKAP1LP55160 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.98■■□□□ 1.11
NCKAP1LP55160 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
NCKAP1LP55160 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1LP55160 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1LP55160 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1LP55160 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1LP55160 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1LP55160 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1LP55160 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1LP55160 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
NCKAP1LP55160 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1LP55160 KRT16P6-202ENST00000425692 1426 ntBASIC21.97■■□□□ 1.11
NCKAP1LP55160 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1LP55160 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
NCKAP1LP55160 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
NCKAP1LP55160 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1LP55160 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1LP55160 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.96■■□□□ 1.11
NCKAP1LP55160 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.96■■□□□ 1.11
NCKAP1LP55160 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1LP55160 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1LP55160 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1LP55160 ESRRAP1-201ENST00000400596 1257 ntBASIC21.96■■□□□ 1.11
NCKAP1LP55160 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.96■■□□□ 1.11
NCKAP1LP55160 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.96■■□□□ 1.11
NCKAP1LP55160 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.96■■□□□ 1.11
NCKAP1LP55160 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1LP55160 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.96■■□□□ 1.11
NCKAP1LP55160 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.96■■□□□ 1.11
NCKAP1LP55160 AC120498.8-201ENST00000614275 531 ntBASIC21.96■■□□□ 1.11
NCKAP1LP55160 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1LP55160 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
NCKAP1LP55160 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1LP55160 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1LP55160 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1LP55160 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.96■■□□□ 1.11
NCKAP1LP55160 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
NCKAP1LP55160 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1LP55160 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1LP55160 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1LP55160 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1LP55160 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.95■■□□□ 1.1
NCKAP1LP55160 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1LP55160 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.95■■□□□ 1.1
NCKAP1LP55160 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.95■■□□□ 1.1
NCKAP1LP55160 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.95■■□□□ 1.1
NCKAP1LP55160 AL391422.3-201ENST00000603791 2761 ntBASIC21.95■■□□□ 1.1
NCKAP1LP55160 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1LP55160 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.95■■□□□ 1.1
NCKAP1LP55160 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.95■■□□□ 1.1
NCKAP1LP55160 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1LP55160 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1LP55160 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NCKAP1LP55160 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
NCKAP1LP55160 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.94■■□□□ 1.1
NCKAP1LP55160 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NCKAP1LP55160 POU5F1P3-201ENST00000428824 1078 ntBASIC21.94■■□□□ 1.1
NCKAP1LP55160 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.94■■□□□ 1.1
NCKAP1LP55160 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NCKAP1LP55160 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.94■■□□□ 1.1
NCKAP1LP55160 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
NCKAP1LP55160 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms