Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.63■□□□□ 0.57
PSMD4P55036 AL109923.1-201ENST00000618799 583 ntBASIC18.63■□□□□ 0.57
PSMD4P55036 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSMD4P55036 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSMD4P55036 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.63■□□□□ 0.57
PSMD4P55036 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PSMD4P55036 DPP3P2-201ENST00000416030 1696 ntBASIC18.63■□□□□ 0.57
PSMD4P55036 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.63■□□□□ 0.57
PSMD4P55036 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSMD4P55036 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.62■□□□□ 0.57
PSMD4P55036 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSMD4P55036 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSMD4P55036 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSMD4P55036 C2orf69P4-201ENST00000565394 541 ntBASIC18.62■□□□□ 0.57
PSMD4P55036 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.62■□□□□ 0.57
PSMD4P55036 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PSMD4P55036 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.62■□□□□ 0.57
PSMD4P55036 AC092118.2-201ENST00000613495 667 ntBASIC18.62■□□□□ 0.57
PSMD4P55036 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.62■□□□□ 0.57
PSMD4P55036 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSMD4P55036 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
PSMD4P55036 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
PSMD4P55036 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSMD4P55036 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSMD4P55036 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSMD4P55036 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PSMD4P55036 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PSMD4P55036 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PSMD4P55036 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.61■□□□□ 0.57
PSMD4P55036 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.61■□□□□ 0.57
PSMD4P55036 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.61■□□□□ 0.57
PSMD4P55036 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PSMD4P55036 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
PSMD4P55036 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.61■□□□□ 0.57
PSMD4P55036 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.61■□□□□ 0.57
PSMD4P55036 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PSMD4P55036 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PSMD4P55036 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PSMD4P55036 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PSMD4P55036 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.6■□□□□ 0.57
PSMD4P55036 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.6■□□□□ 0.57
PSMD4P55036 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSMD4P55036 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.6■□□□□ 0.57
PSMD4P55036 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.6■□□□□ 0.57
PSMD4P55036 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.6■□□□□ 0.57
PSMD4P55036 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PSMD4P55036 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSMD4P55036 AC073130.3-201ENST00000624389 2278 ntBASIC18.6■□□□□ 0.57
PSMD4P55036 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PSMD4P55036 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PSMD4P55036 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PSMD4P55036 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.6■□□□□ 0.57
PSMD4P55036 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.6■□□□□ 0.57
PSMD4P55036 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.6■□□□□ 0.57
PSMD4P55036 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.6■□□□□ 0.57
PSMD4P55036 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PSMD4P55036 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSMD4P55036 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.6■□□□□ 0.57
PSMD4P55036 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PSMD4P55036 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.6■□□□□ 0.57
PSMD4P55036 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PSMD4P55036 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSMD4P55036 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PSMD4P55036 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PSMD4P55036 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.6■□□□□ 0.57
PSMD4P55036 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.6■□□□□ 0.57
PSMD4P55036 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.6■□□□□ 0.57
PSMD4P55036 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PSMD4P55036 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSMD4P55036 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.59■□□□□ 0.57
PSMD4P55036 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSMD4P55036 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSMD4P55036 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSMD4P55036 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PSMD4P55036 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.59■□□□□ 0.57
PSMD4P55036 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PSMD4P55036 GUSBP6-202ENST00000438529 1198 ntBASIC18.59■□□□□ 0.57
PSMD4P55036 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.59■□□□□ 0.57
PSMD4P55036 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.59■□□□□ 0.57
PSMD4P55036 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PSMD4P55036 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.59■□□□□ 0.57
PSMD4P55036 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PSMD4P55036 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PSMD4P55036 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PSMD4P55036 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms