Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2A1P52655 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2A1P52655 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1P52655 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2A1P52655 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1P52655 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1P52655 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF2A1P52655 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF2A1P52655 AC026471.6-201ENST00000622954 1905 ntBASIC19.63■□□□□ 0.73
GTF2A1P52655 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1P52655 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1P52655 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1P52655 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1P52655 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2A1P52655 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1P52655 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1P52655 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1P52655 KRT18P60-201ENST00000312876 1297 ntBASIC19.62■□□□□ 0.73
GTF2A1P52655 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1P52655 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.62■□□□□ 0.73
GTF2A1P52655 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.62■□□□□ 0.73
GTF2A1P52655 AC120024.1-201ENST00000562672 995 ntBASIC19.62■□□□□ 0.73
GTF2A1P52655 AC019171.1-201ENST00000601251 1056 ntBASIC19.62■□□□□ 0.73
GTF2A1P52655 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1P52655 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1P52655 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
GTF2A1P52655 AC084018.2-201ENST00000613093 2607 ntBASIC19.62■□□□□ 0.73
GTF2A1P52655 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
GTF2A1P52655 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.62■□□□□ 0.73
GTF2A1P52655 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
GTF2A1P52655 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1P52655 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A1P52655 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
GTF2A1P52655 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2A1P52655 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
GTF2A1P52655 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GTF2A1P52655 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
GTF2A1P52655 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
GTF2A1P52655 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
GTF2A1P52655 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2A1P52655 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2A1P52655 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
GTF2A1P52655 MST1L-201ENST00000442552 2185 ntBASIC19.61■□□□□ 0.73
GTF2A1P52655 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GTF2A1P52655 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A1P52655 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2A1P52655 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF2A1P52655 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
GTF2A1P52655 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1P52655 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1P52655 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1P52655 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GTF2A1P52655 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1P52655 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2A1P52655 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
GTF2A1P52655 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.6■□□□□ 0.73
GTF2A1P52655 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1P52655 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1P52655 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2A1P52655 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GTF2A1P52655 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
GTF2A1P52655 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GTF2A1P52655 AC004448.1-201ENST00000458332 883 ntBASIC19.6■□□□□ 0.73
GTF2A1P52655 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.6■□□□□ 0.73
GTF2A1P52655 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2A1P52655 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
GTF2A1P52655 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
GTF2A1P52655 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1P52655 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1P52655 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1P52655 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1P52655 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2A1P52655 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A1P52655 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.59■□□□□ 0.73
GTF2A1P52655 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
GTF2A1P52655 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
GTF2A1P52655 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GTF2A1P52655 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GTF2A1P52655 RARRES2P2-201ENST00000394842 485 ntBASIC19.59■□□□□ 0.73
GTF2A1P52655 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms