Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCNKAP51800 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCNKAP51800 HLA-G-202ENST00000376815 851 ntBASIC19.64■□□□□ 0.73
CLCNKAP51800 HLA-G-203ENST00000376818 1127 ntBASIC19.64■□□□□ 0.73
CLCNKAP51800 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.64■□□□□ 0.73
CLCNKAP51800 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCNKAP51800 AL031963.3-201ENST00000606441 850 ntBASIC19.64■□□□□ 0.73
CLCNKAP51800 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CLCNKAP51800 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCNKAP51800 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
CLCNKAP51800 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCNKAP51800 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCNKAP51800 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCNKAP51800 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CLCNKAP51800 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCNKAP51800 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCNKAP51800 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.64■□□□□ 0.73
CLCNKAP51800 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLCNKAP51800 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLCNKAP51800 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLCNKAP51800 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCNKAP51800 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCNKAP51800 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCNKAP51800 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCNKAP51800 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 KRT8P20-201ENST00000423953 1409 ntBASIC19.63■□□□□ 0.73
CLCNKAP51800 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CLCNKAP51800 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
CLCNKAP51800 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.63■□□□□ 0.73
CLCNKAP51800 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCNKAP51800 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.63■□□□□ 0.73
CLCNKAP51800 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLCNKAP51800 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCNKAP51800 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CLCNKAP51800 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCNKAP51800 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCNKAP51800 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 AC073314.1-201ENST00000568729 2216 ntBASIC19.62■□□□□ 0.73
CLCNKAP51800 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CLCNKAP51800 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.62■□□□□ 0.73
CLCNKAP51800 AC142381.4-202ENST00000563973 229 ntBASIC19.62■□□□□ 0.73
CLCNKAP51800 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCNKAP51800 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.62■□□□□ 0.73
CLCNKAP51800 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CLCNKAP51800 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCNKAP51800 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCNKAP51800 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCNKAP51800 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCNKAP51800 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCNKAP51800 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CLCNKAP51800 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCNKAP51800 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCNKAP51800 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCNKAP51800 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCNKAP51800 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCNKAP51800 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.61■□□□□ 0.73
CLCNKAP51800 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.61■□□□□ 0.73
CLCNKAP51800 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CLCNKAP51800 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.61■□□□□ 0.73
CLCNKAP51800 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCNKAP51800 MTDHP1-201ENST00000605323 784 ntBASIC19.61■□□□□ 0.73
CLCNKAP51800 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CLCNKAP51800 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCNKAP51800 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCNKAP51800 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCNKAP51800 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCNKAP51800 KRT8P17-201ENST00000453110 1448 ntBASIC19.6■□□□□ 0.73
CLCNKAP51800 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCNKAP51800 SMG8-203ENST00000578922 2178 ntBASIC19.6■□□□□ 0.73
CLCNKAP51800 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCNKAP51800 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CLCNKAP51800 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCNKAP51800 AC233263.1-201ENST00000578059 224 ntBASIC19.6■□□□□ 0.73
CLCNKAP51800 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCNKAP51800 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCNKAP51800 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.6■□□□□ 0.73
CLCNKAP51800 AC020907.5-201ENST00000624372 1936 ntBASIC19.6■□□□□ 0.73
CLCNKAP51800 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms