Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MECP2P51608 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MECP2P51608 AC079598.2-202ENST00000546624 1451 ntBASIC17.04■□□□□ 0.32
MECP2P51608 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MECP2P51608 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MECP2P51608 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MECP2P51608 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MECP2P51608 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MECP2P51608 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MECP2P51608 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MECP2P51608 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MECP2P51608 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MECP2P51608 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
MECP2P51608 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MECP2P51608 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.03■□□□□ 0.32
MECP2P51608 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MECP2P51608 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MECP2P51608 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MECP2P51608 AC096631.2-201ENST00000436136 790 ntBASIC17.03■□□□□ 0.32
MECP2P51608 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MECP2P51608 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.03■□□□□ 0.32
MECP2P51608 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MECP2P51608 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MECP2P51608 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MECP2P51608 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MECP2P51608 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MECP2P51608 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MECP2P51608 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MECP2P51608 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
MECP2P51608 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.02■□□□□ 0.32
MECP2P51608 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
MECP2P51608 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MECP2P51608 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MECP2P51608 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MECP2P51608 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MECP2P51608 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MECP2P51608 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MECP2P51608 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
MECP2P51608 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.02■□□□□ 0.32
MECP2P51608 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MECP2P51608 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MECP2P51608 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MECP2P51608 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.32
MECP2P51608 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
MECP2P51608 AC133561.4-201ENST00000566112 224 ntBASIC17.02■□□□□ 0.32
MECP2P51608 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.02■□□□□ 0.31
MECP2P51608 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
MECP2P51608 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MECP2P51608 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.02■□□□□ 0.31
MECP2P51608 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MECP2P51608 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
MECP2P51608 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
MECP2P51608 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
MECP2P51608 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
MECP2P51608 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
MECP2P51608 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MECP2P51608 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.01■□□□□ 0.31
MECP2P51608 AL691432.2-201ENST00000607222 2038 ntBASIC17.01■□□□□ 0.31
MECP2P51608 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.01■□□□□ 0.31
MECP2P51608 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
MECP2P51608 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.01■□□□□ 0.31
MECP2P51608 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
MECP2P51608 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
MECP2P51608 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 BCL2-203ENST00000589955 5011 ntBASIC17.01■□□□□ 0.31
MECP2P51608 UNC93B3-201ENST00000308076 687 ntBASIC17.01■□□□□ 0.31
MECP2P51608 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.01■□□□□ 0.31
MECP2P51608 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.01■□□□□ 0.31
MECP2P51608 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.01■□□□□ 0.31
MECP2P51608 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
MECP2P51608 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
MECP2P51608 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MECP2P51608 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.01■□□□□ 0.31
MECP2P51608 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17■□□□□ 0.31
MECP2P51608 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MECP2P51608 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MECP2P51608 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
MECP2P51608 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17■□□□□ 0.31
MECP2P51608 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
MECP2P51608 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
MECP2P51608 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MECP2P51608 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MECP2P51608 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17■□□□□ 0.31
MECP2P51608 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17■□□□□ 0.31
MECP2P51608 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MECP2P51608 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17■□□□□ 0.31
MECP2P51608 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17■□□□□ 0.31
MECP2P51608 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MECP2P51608 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms