Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UBE2AP49459 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC12.68□□□□□ -0.38
UBE2AP49459 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2AP49459 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
UBE2AP49459 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
UBE2AP49459 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
UBE2AP49459 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC12.67□□□□□ -0.38
UBE2AP49459 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC12.67□□□□□ -0.38
UBE2AP49459 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC12.67□□□□□ -0.38
UBE2AP49459 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
UBE2AP49459 NTF6G-201ENST00000591094 616 ntBASIC12.67□□□□□ -0.38
UBE2AP49459 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
UBE2AP49459 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC12.67□□□□□ -0.38
UBE2AP49459 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 GABARAPL3-202ENST00000624044 1851 ntBASIC12.67□□□□□ -0.38
UBE2AP49459 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
UBE2AP49459 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC12.67□□□□□ -0.38
UBE2AP49459 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC12.67□□□□□ -0.38
UBE2AP49459 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC12.67□□□□□ -0.38
UBE2AP49459 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2AP49459 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
UBE2AP49459 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
UBE2AP49459 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC12.66□□□□□ -0.38
UBE2AP49459 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2AP49459 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
UBE2AP49459 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
UBE2AP49459 PARP1-202ENST00000366792 553 ntTSL 3 BASIC12.66□□□□□ -0.38
UBE2AP49459 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2AP49459 AC007322.3-201ENST00000426526 701 ntBASIC12.66□□□□□ -0.38
UBE2AP49459 GXYLT1P2-201ENST00000433312 1230 ntBASIC12.66□□□□□ -0.38
UBE2AP49459 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2AP49459 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC12.66□□□□□ -0.38
UBE2AP49459 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2AP49459 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 FGF8-207ENST00000618991 856 ntTSL 3 BASIC12.66□□□□□ -0.38
UBE2AP49459 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
UBE2AP49459 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 AC092720.2-201ENST00000602388 1665 ntBASIC12.66□□□□□ -0.38
UBE2AP49459 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
UBE2AP49459 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
UBE2AP49459 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2AP49459 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2AP49459 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UBE2AP49459 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBE2AP49459 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms