Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.82□□□□□ -0.2
RPL13AP40429 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL13AP40429 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.82□□□□□ -0.2
RPL13AP40429 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.81□□□□□ -0.2
RPL13AP40429 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.81□□□□□ -0.2
RPL13AP40429 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RPL13AP40429 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RPL13AP40429 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RPL13AP40429 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC13.81□□□□□ -0.2
RPL13AP40429 AC004408.2-201ENST00000623613 2777 ntBASIC13.81□□□□□ -0.2
RPL13AP40429 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
RPL13AP40429 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC13.81□□□□□ -0.2
RPL13AP40429 TK2-202ENST00000417693 1046 ntTSL 2 BASIC13.81□□□□□ -0.2
RPL13AP40429 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
RPL13AP40429 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC13.81□□□□□ -0.2
RPL13AP40429 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.81□□□□□ -0.2
RPL13AP40429 AP000974.1-201ENST00000623909 2387 ntBASIC13.81□□□□□ -0.2
RPL13AP40429 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RPL13AP40429 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC13.81□□□□□ -0.2
RPL13AP40429 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPL13AP40429 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RPL13AP40429 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RPL13AP40429 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
RPL13AP40429 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL13AP40429 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL13AP40429 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.8□□□□□ -0.2
RPL13AP40429 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RPL13AP40429 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.8□□□□□ -0.2
RPL13AP40429 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL13AP40429 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RPL13AP40429 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC13.8□□□□□ -0.2
RPL13AP40429 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC13.8□□□□□ -0.2
RPL13AP40429 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL13AP40429 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.8□□□□□ -0.2
RPL13AP40429 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RPL13AP40429 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL13AP40429 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC13.8□□□□□ -0.2
RPL13AP40429 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL13AP40429 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RPL13AP40429 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
RPL13AP40429 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RPL13AP40429 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.79□□□□□ -0.2
RPL13AP40429 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RPL13AP40429 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL13AP40429 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.79□□□□□ -0.2
RPL13AP40429 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL13AP40429 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPL13AP40429 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms