Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 MLH3YPL164C 2148 nt2.05□□□□□ -2.08
DEF1P35732 IFH1YLR223C 3258 nt2.04□□□□□ -2.08
DEF1P35732 MDS3YGL197W 4464 nt2.03□□□□□ -2.08
DEF1P35732 YIL002W-AYIL002W-A 210 nt2.03□□□□□ -2.08
DEF1P35732 HMI1YOL095C 2121 nt2.02□□□□□ -2.09
DEF1P35732 YKR075W-AYKR075W-A 270 nt2.02□□□□□ -2.09
DEF1P35732 TRL1YJL087C 2484 nt2.02□□□□□ -2.09
DEF1P35732 TTI1YKL033W 3117 nt2.02□□□□□ -2.09
DEF1P35732 PKH2YOL100W 3246 nt2.01□□□□□ -2.09
DEF1P35732 YLL066W-BYLL066W-B 171 nt2□□□□□ -2.09
DEF1P35732 RTT107YHR154W 3213 nt2□□□□□ -2.09
DEF1P35732 MSH5YDL154W 2706 nt1.99□□□□□ -2.09
DEF1P35732 YGL182CYGL182C 324 nt1.99□□□□□ -2.09
DEF1P35732 UBP1YDL122W 2430 nt1.99□□□□□ -2.09
DEF1P35732 tS(GCU)Q1tS(GCU)Q1 86 nt1.98□□□□□ -2.09
DEF1P35732 COG4YPR105C 2586 nt1.97□□□□□ -2.09
DEF1P35732 QCR9YGR183C 201 nt1.97□□□□□ -2.09
DEF1P35732 snR45snR45 172 nt1.97□□□□□ -2.09
DEF1P35732 APL1YJR005W 2103 nt1.97□□□□□ -2.09
DEF1P35732 MET18YIL128W 3099 nt1.97□□□□□ -2.09
DEF1P35732 SEC31YDL195W 3822 nt1.96□□□□□ -2.1
DEF1P35732 STF2YGR008C 255 nt1.96□□□□□ -2.1
DEF1P35732 YMR175W-AYMR175W-A 195 nt1.96□□□□□ -2.1
DEF1P35732 GYP5YPL249C 2685 nt1.96□□□□□ -2.1
DEF1P35732 ATG11YPR049C 3537 nt1.96□□□□□ -2.1
DEF1P35732 MYO2YOR326W 4725 nt1.95□□□□□ -2.1
DEF1P35732 YHR131W-AYHR131W-A 246 nt1.95□□□□□ -2.1
DEF1P35732 UTP8YGR128C 2142 nt1.94□□□□□ -2.1
DEF1P35732 SLI15YBR156C 2097 nt1.94□□□□□ -2.1
DEF1P35732 YAL067W-AYAL067W-A 228 nt1.94□□□□□ -2.1
DEF1P35732 NUP157YER105C 4176 nt1.94□□□□□ -2.1
DEF1P35732 STB6YKL072W 2301 nt1.94□□□□□ -2.1
DEF1P35732 RCO1YMR075W 2055 nt1.94□□□□□ -2.1
DEF1P35732 snR39BsnR39B 96 nt1.93□□□□□ -2.1
DEF1P35732 MYO4YAL029C 4416 nt1.92□□□□□ -2.1
DEF1P35732 TDA9YML081W 3756 nt1.92□□□□□ -2.1
DEF1P35732 YCR087C-AYCR087C-A 462 nt1.92□□□□□ -2.1
DEF1P35732 RPL37BYDR500C 267 nt1.92□□□□□ -2.1
DEF1P35732 RTP1YMR185W 2946 nt1.92□□□□□ -2.1
DEF1P35732 PET309YLR067C 2898 nt1.92□□□□□ -2.1
DEF1P35732 CHS1YNL192W 3396 nt1.92□□□□□ -2.1
DEF1P35732 IRE1YHR079C 3348 nt1.91□□□□□ -2.1
DEF1P35732 SYH1YPL105C 2550 nt1.91□□□□□ -2.1
DEF1P35732 CTR9YOL145C 3234 nt1.91□□□□□ -2.1
DEF1P35732 INO80YGL150C 4470 nt1.9□□□□□ -2.11
DEF1P35732 YER172C-AYER172C-A 381 nt1.9□□□□□ -2.11
DEF1P35732 YBL039C-AYBL039C-A 84 nt1.9□□□□□ -2.11
DEF1P35732 FIG2YCR089W 4830 nt1.9□□□□□ -2.11
DEF1P35732 MON2YNL297C 4911 nt1.89□□□□□ -2.11
DEF1P35732 YGL123C-AYGL123C-A 231 nt1.89□□□□□ -2.11
DEF1P35732 YLL020CYLL020C 306 nt1.89□□□□□ -2.11
DEF1P35732 FRK1YPL141C 2598 nt1.88□□□□□ -2.11
DEF1P35732 YDL206WYDL206W 2289 nt1.88□□□□□ -2.11
DEF1P35732 BFR2YDR299W 1605 nt1.88□□□□□ -2.11
DEF1P35732 HIR3YJR140C 4947 nt1.87□□□□□ -2.11
DEF1P35732 snR81snR81 201 nt1.87□□□□□ -2.11
DEF1P35732 YOR161W-AYOR161W-A 81 nt1.87□□□□□ -2.11
DEF1P35732 ADR1YDR216W 3972 nt1.87□□□□□ -2.11
DEF1P35732 SSK2YNR031C 4740 nt1.86□□□□□ -2.11
DEF1P35732 SPC110YDR356W 2835 nt1.86□□□□□ -2.11
DEF1P35732 MSH6YDR097C 3729 nt1.86□□□□□ -2.11
DEF1P35732 UFD2YDL190C 2886 nt1.85□□□□□ -2.11
DEF1P35732 PIK1YNL267W 3201 nt1.85□□□□□ -2.11
DEF1P35732 FAB1YFR019W 6837 nt1.84□□□□□ -2.11
DEF1P35732 SXM1YDR395W 2835 nt1.84□□□□□ -2.11
DEF1P35732 TAH1YCR060W 336 nt1.84□□□□□ -2.11
DEF1P35732 SPO24YPR036W-A 204 nt1.84□□□□□ -2.11
DEF1P35732 PET127YOR017W 2403 nt1.83□□□□□ -2.12
DEF1P35732 FYV8YGR196C 2454 nt1.83□□□□□ -2.12
DEF1P35732 TUS1YLR425W 3924 nt1.83□□□□□ -2.12
DEF1P35732 YJR039WYJR039W 3366 nt1.82□□□□□ -2.12
DEF1P35732 COA6YMR244C-A 315 nt1.82□□□□□ -2.12
DEF1P35732 YOR093CYOR093C 4947 nt1.82□□□□□ -2.12
DEF1P35732 DNF3YMR162C 4971 nt1.82□□□□□ -2.12
DEF1P35732 SEC63YOR254C 1992 nt1.81□□□□□ -2.12
DEF1P35732 IRA1YBR140C 9279 nt1.81□□□□□ -2.12
DEF1P35732 YLR419WYLR419W 4308 nt1.81□□□□□ -2.12
DEF1P35732 tM(CAU)Q2tM(CAU)Q2 78 nt1.81□□□□□ -2.12
DEF1P35732 YMR272W-BYMR272W-B 108 nt1.81□□□□□ -2.12
DEF1P35732 RSM22YKL155C 1887 nt1.8□□□□□ -2.12
DEF1P35732 SFB2YNL049C 2631 nt1.79□□□□□ -2.12
DEF1P35732 EAF1YDR359C 2949 nt1.78□□□□□ -2.12
DEF1P35732 YKL100W-AYKL100W-A 90 nt1.78□□□□□ -2.12
DEF1P35732 POL5YEL055C 3069 nt1.78□□□□□ -2.12
DEF1P35732 SEY1YOR165W 2331 nt1.77□□□□□ -2.13
DEF1P35732 COX5BYIL111W 456 nt1.77□□□□□ -2.13
DEF1P35732 SMC1YFL008W 3678 nt1.77□□□□□ -2.13
DEF1P35732 RAD50YNL250W 3939 nt1.76□□□□□ -2.13
DEF1P35732 YAL037C-AYAL037C-A 93 nt1.75□□□□□ -2.13
DEF1P35732 SEC21YNL287W 2808 nt1.75□□□□□ -2.13
DEF1P35732 HKR1YDR420W 5409 nt1.74□□□□□ -2.13
DEF1P35732 YJL127W-AYJL127W-A 117 nt1.74□□□□□ -2.13
DEF1P35732 snR62snR62 100 nt1.73□□□□□ -2.13
DEF1P35732 YDR210WYDR210W 228 nt1.73□□□□□ -2.13
DEF1P35732 TBS1YBR150C 3285 nt1.73□□□□□ -2.13
DEF1P35732 COG6YNL041C 2520 nt1.73□□□□□ -2.13
DEF1P35732 YML002WYML002W 2214 nt1.72□□□□□ -2.13
DEF1P35732 YBR072C-AYBR072C-A 162 nt1.72□□□□□ -2.13
DEF1P35732 KAP120YPL125W 3099 nt1.71□□□□□ -2.14
DEF1P35732 YNL266WYNL266W 420 nt1.71□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 43.2 ms