Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 BX005040.4-201ENST00000637145 1518 ntBASIC17.94■□□□□ 0.46
SOX6P35712 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX6P35712 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX6P35712 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX6P35712 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.94■□□□□ 0.46
SOX6P35712 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.94■□□□□ 0.46
SOX6P35712 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SOX6P35712 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX6P35712 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX6P35712 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX6P35712 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX6P35712 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX6P35712 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX6P35712 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SOX6P35712 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.93■□□□□ 0.46
SOX6P35712 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.93■□□□□ 0.46
SOX6P35712 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.93■□□□□ 0.46
SOX6P35712 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX6P35712 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX6P35712 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.92■□□□□ 0.46
SOX6P35712 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX6P35712 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX6P35712 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX6P35712 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX6P35712 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.92■□□□□ 0.46
SOX6P35712 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.92■□□□□ 0.46
SOX6P35712 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.92■□□□□ 0.46
SOX6P35712 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.92■□□□□ 0.46
SOX6P35712 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX6P35712 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX6P35712 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SOX6P35712 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.92■□□□□ 0.46
SOX6P35712 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX6P35712 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX6P35712 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX6P35712 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX6P35712 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX6P35712 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX6P35712 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
SOX6P35712 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX6P35712 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SOX6P35712 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX6P35712 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
SOX6P35712 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.91■□□□□ 0.46
SOX6P35712 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX6P35712 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
SOX6P35712 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX6P35712 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX6P35712 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX6P35712 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SOX6P35712 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.9■□□□□ 0.46
SOX6P35712 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.9■□□□□ 0.46
SOX6P35712 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.9■□□□□ 0.46
SOX6P35712 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SOX6P35712 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SOX6P35712 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.9■□□□□ 0.46
SOX6P35712 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.9■□□□□ 0.46
SOX6P35712 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
SOX6P35712 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.9■□□□□ 0.46
SOX6P35712 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.9■□□□□ 0.46
SOX6P35712 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.9■□□□□ 0.46
SOX6P35712 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.9■□□□□ 0.46
SOX6P35712 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.9■□□□□ 0.46
SOX6P35712 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX6P35712 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.9■□□□□ 0.46
SOX6P35712 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SOX6P35712 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.89■□□□□ 0.46
SOX6P35712 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
SOX6P35712 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SOX6P35712 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.89■□□□□ 0.45
SOX6P35712 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SOX6P35712 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.89■□□□□ 0.45
SOX6P35712 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.89■□□□□ 0.45
SOX6P35712 AL138781.2-201ENST00000617896 1843 ntBASIC17.89■□□□□ 0.45
SOX6P35712 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SOX6P35712 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms