Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CLCN1P35523 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
CLCN1P35523 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
CLCN1P35523 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CLCN1P35523 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CLCN1P35523 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CLCN1P35523 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
CLCN1P35523 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.71■■□□□ 1.23
CLCN1P35523 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.71■■□□□ 1.23
CLCN1P35523 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CLCN1P35523 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
CLCN1P35523 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CLCN1P35523 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.71■■□□□ 1.23
CLCN1P35523 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.71■■□□□ 1.23
CLCN1P35523 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CLCN1P35523 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CLCN1P35523 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CLCN1P35523 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CLCN1P35523 AC005224.4-201ENST00000583262 1652 ntBASIC22.71■■□□□ 1.23
CLCN1P35523 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CLCN1P35523 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CLCN1P35523 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CLCN1P35523 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.71■■□□□ 1.23
CLCN1P35523 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CLCN1P35523 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.7■■□□□ 1.23
CLCN1P35523 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CLCN1P35523 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CLCN1P35523 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CLCN1P35523 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.22
CLCN1P35523 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CLCN1P35523 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.7■■□□□ 1.22
CLCN1P35523 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
CLCN1P35523 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.7■■□□□ 1.22
CLCN1P35523 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.7■■□□□ 1.22
CLCN1P35523 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CLCN1P35523 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CLCN1P35523 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CLCN1P35523 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC22.69■■□□□ 1.22
CLCN1P35523 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN1P35523 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN1P35523 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.69■■□□□ 1.22
CLCN1P35523 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CLCN1P35523 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CLCN1P35523 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.69■■□□□ 1.22
CLCN1P35523 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN1P35523 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.69■■□□□ 1.22
CLCN1P35523 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CLCN1P35523 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN1P35523 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN1P35523 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN1P35523 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.69■■□□□ 1.22
CLCN1P35523 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.69■■□□□ 1.22
CLCN1P35523 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN1P35523 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN1P35523 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN1P35523 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN1P35523 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN1P35523 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CLCN1P35523 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
CLCN1P35523 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.68■■□□□ 1.22
CLCN1P35523 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN1P35523 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.68■■□□□ 1.22
CLCN1P35523 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.68■■□□□ 1.22
CLCN1P35523 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
CLCN1P35523 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.68■■□□□ 1.22
CLCN1P35523 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.68■■□□□ 1.22
CLCN1P35523 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.68■■□□□ 1.22
CLCN1P35523 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.68■■□□□ 1.22
CLCN1P35523 AC105265.2-201ENST00000467189 838 ntBASIC22.68■■□□□ 1.22
CLCN1P35523 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.68■■□□□ 1.22
CLCN1P35523 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN1P35523 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN1P35523 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN1P35523 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN1P35523 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CLCN1P35523 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.68■■□□□ 1.22
CLCN1P35523 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN1P35523 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN1P35523 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN1P35523 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CLCN1P35523 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 FP700111.2-201ENST00000619190 1892 ntBASIC22.67■■□□□ 1.22
CLCN1P35523 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.67■■□□□ 1.22
CLCN1P35523 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.67■■□□□ 1.22
CLCN1P35523 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.67■■□□□ 1.22
CLCN1P35523 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN1P35523 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.66■■□□□ 1.22
CLCN1P35523 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN1P35523 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms