Protein–RNA interactions for Protein: P32583

SRP40, Suppressor protein SRP40, yeastyeast

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRP40P32583 NUP145YGL092W 3954 nt1.85□□□□□ -2.11
SRP40P32583 TRM732YMR259C 4263 nt1.85□□□□□ -2.11
SRP40P32583 YOR072W-BYOR072W-B 162 nt1.84□□□□□ -2.11
SRP40P32583 YAR009CYAR009C 3591 nt1.83□□□□□ -2.12
SRP40P32583 APL3YBL037W 3078 nt1.82□□□□□ -2.12
SRP40P32583 YLR342W-AYLR342W-A 174 nt1.82□□□□□ -2.12
SRP40P32583 CDC31YOR257W 486 nt1.82□□□□□ -2.12
SRP40P32583 snR46snR46 197 nt1.82□□□□□ -2.12
SRP40P32583 SLD3YGL113W 2007 nt1.82□□□□□ -2.12
SRP40P32583 SET3YKR029C 2256 nt1.81□□□□□ -2.12
SRP40P32583 ECM12YHR021W-A 456 nt1.81□□□□□ -2.12
SRP40P32583 PMD1YER132C 5262 nt1.81□□□□□ -2.12
SRP40P32583 BRR2YER172C 6492 nt1.81□□□□□ -2.12
SRP40P32583 YOR345CYOR345C 351 nt1.8□□□□□ -2.12
SRP40P32583 AZF1YOR113W 2745 nt1.8□□□□□ -2.12
SRP40P32583 MYO2YOR326W 4725 nt1.79□□□□□ -2.12
SRP40P32583 AHC1YOR023C 1701 nt1.79□□□□□ -2.12
SRP40P32583 FIG4YNL325C 2640 nt1.78□□□□□ -2.12
SRP40P32583 ATP8Q0080 147 nt1.78□□□□□ -2.12
SRP40P32583 SEC3YER008C 4011 nt1.77□□□□□ -2.13
SRP40P32583 YMR247W-AYMR247W-A 144 nt1.77□□□□□ -2.13
SRP40P32583 SXM1YDR395W 2835 nt1.77□□□□□ -2.13
SRP40P32583 YLL019W-AYLL019W-A 93 nt1.76□□□□□ -2.13
SRP40P32583 HUG1YML058W-A 207 nt1.76□□□□□ -2.13
SRP40P32583 YBR221W-AYBR221W-A 105 nt1.76□□□□□ -2.13
SRP40P32583 MDS3YGL197W 4464 nt1.76□□□□□ -2.13
SRP40P32583 STO1YMR125W 2586 nt1.75□□□□□ -2.13
SRP40P32583 ULI1YFR026C 510 nt1.75□□□□□ -2.13
SRP40P32583 YJL026C-AYJL026C-A 222 nt1.75□□□□□ -2.13
SRP40P32583 snR52snR52 92 nt1.75□□□□□ -2.13
SRP40P32583 STF2YGR008C 255 nt1.74□□□□□ -2.13
SRP40P32583 SPC110YDR356W 2835 nt1.74□□□□□ -2.13
SRP40P32583 YDL196WYDL196W 330 nt1.73□□□□□ -2.13
SRP40P32583 YBR200W-AYBR200W-A 165 nt1.73□□□□□ -2.13
SRP40P32583 PMP1YCR024C-A 123 nt1.72□□□□□ -2.13
SRP40P32583 YLL020CYLL020C 306 nt1.72□□□□□ -2.13
SRP40P32583 RPL33BYOR234C 324 nt1.72□□□□□ -2.13
SRP40P32583 NUP157YER105C 4176 nt1.72□□□□□ -2.13
SRP40P32583 APL1YJR005W 2103 nt1.72□□□□□ -2.13
SRP40P32583 CAT8YMR280C 4302 nt1.71□□□□□ -2.14
SRP40P32583 NUP188YML103C 4968 nt1.7□□□□□ -2.14
SRP40P32583 YDR354C-AYDR354C-A 144 nt1.7□□□□□ -2.14
SRP40P32583 COY1YKL179C 2040 nt1.7□□□□□ -2.14
SRP40P32583 HAL9YOL089C 3093 nt1.7□□□□□ -2.14
SRP40P32583 tQ(UUG)E2tQ(UUG)E2 72 nt1.69□□□□□ -2.14
SRP40P32583 YAL067W-AYAL067W-A 228 nt1.69□□□□□ -2.14
SRP40P32583 WAR1YML076C 2835 nt1.68□□□□□ -2.14
SRP40P32583 YOR170WYOR170W 306 nt1.68□□□□□ -2.14
SRP40P32583 YIL134C-AYIL134C-A 204 nt1.67□□□□□ -2.14
SRP40P32583 EAF1YDR359C 2949 nt1.67□□□□□ -2.14
SRP40P32583 KAP120YPL125W 3099 nt1.67□□□□□ -2.14
SRP40P32583 STB6YKL072W 2301 nt1.66□□□□□ -2.14
SRP40P32583 PAA1YDR071C 576 nt1.66□□□□□ -2.14
SRP40P32583 YNL170WYNL170W 396 nt1.66□□□□□ -2.14
SRP40P32583 YGR130CYGR130C 2451 nt1.66□□□□□ -2.14
SRP40P32583 YBL053WYBL053W 375 nt1.65□□□□□ -2.15
SRP40P32583 YOR381W-AYOR381W-A 168 nt1.65□□□□□ -2.15
SRP40P32583 RSM22YKL155C 1887 nt1.65□□□□□ -2.15
SRP40P32583 FIG2YCR089W 4830 nt1.64□□□□□ -2.15
SRP40P32583 NOP9YJL010C 2001 nt1.64□□□□□ -2.15
SRP40P32583 YNL211CYNL211C 261 nt1.63□□□□□ -2.15
SRP40P32583 TTI1YKL033W 3117 nt1.62□□□□□ -2.15
SRP40P32583 CDC39YCR093W 6327 nt1.62□□□□□ -2.15
SRP40P32583 VPS15YBR097W 4365 nt1.61□□□□□ -2.15
SRP40P32583 SDH6YDR379C-A 240 nt1.61□□□□□ -2.15
SRP40P32583 CMC4YMR194C-B 222 nt1.61□□□□□ -2.15
SRP40P32583 MSH3YCR092C 3057 nt1.61□□□□□ -2.15
SRP40P32583 SMC1YFL008W 3678 nt1.6□□□□□ -2.15
SRP40P32583 YEL073CYEL073C 324 nt1.59□□□□□ -2.15
SRP40P32583 RPS30BYOR182C 192 nt1.59□□□□□ -2.15
SRP40P32583 YPL044CYPL044C 549 nt1.58□□□□□ -2.16
SRP40P32583 SSK2YNR031C 4740 nt1.58□□□□□ -2.16
SRP40P32583 PET127YOR017W 2403 nt1.58□□□□□ -2.16
SRP40P32583 PIK1YNL267W 3201 nt1.57□□□□□ -2.16
SRP40P32583 YGR164WYGR164W 336 nt1.57□□□□□ -2.16
SRP40P32583 COX12YLR038C 252 nt1.57□□□□□ -2.16
SRP40P32583 SEC21YNL287W 2808 nt1.57□□□□□ -2.16
SRP40P32583 RPL26BYGR034W 384 nt1.56□□□□□ -2.16
SRP40P32583 MEC1YBR136W 7107 nt1.56□□□□□ -2.16
SRP40P32583 HKR1YDR420W 5409 nt1.56□□□□□ -2.16
SRP40P32583 PRP16YKR086W 3216 nt1.55□□□□□ -2.16
SRP40P32583 CCH1YGR217W 6120 nt1.55□□□□□ -2.16
SRP40P32583 PRP42YDR235W 1635 nt1.55□□□□□ -2.16
SRP40P32583 YCR038W-AYCR038W-A 126 nt1.54□□□□□ -2.16
SRP40P32583 tH(GUG)E1tH(GUG)E1 72 nt1.54□□□□□ -2.16
SRP40P32583 tH(GUG)E2tH(GUG)E2 72 nt1.54□□□□□ -2.16
SRP40P32583 tH(GUG)G1tH(GUG)G1 72 nt1.54□□□□□ -2.16
SRP40P32583 tH(GUG)G2tH(GUG)G2 72 nt1.54□□□□□ -2.16
SRP40P32583 tH(GUG)HtH(GUG)H 72 nt1.54□□□□□ -2.16
SRP40P32583 tH(GUG)KtH(GUG)K 72 nt1.54□□□□□ -2.16
SRP40P32583 tH(GUG)MtH(GUG)M 72 nt1.54□□□□□ -2.16
SRP40P32583 YKL100W-AYKL100W-A 90 nt1.53□□□□□ -2.16
SRP40P32583 ASE1YOR058C 2658 nt1.53□□□□□ -2.16
SRP40P32583 IRA1YBR140C 9279 nt1.53□□□□□ -2.16
SRP40P32583 NST1YNL091W 3723 nt1.53□□□□□ -2.17
SRP40P32583 COX5BYIL111W 456 nt1.51□□□□□ -2.17
SRP40P32583 FYV8YGR196C 2454 nt1.5□□□□□ -2.17
SRP40P32583 YIL002W-AYIL002W-A 210 nt1.49□□□□□ -2.17
SRP40P32583 YGL123C-AYGL123C-A 231 nt1.48□□□□□ -2.17
SRP40P32583 Q0143Q0143 153 nt1.48□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 117 ms