Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EPHA3P29320 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.46■□□□□ 0.71
EPHA3P29320 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EPHA3P29320 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
EPHA3P29320 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
EPHA3P29320 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EPHA3P29320 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EPHA3P29320 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EPHA3P29320 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.45■□□□□ 0.7
EPHA3P29320 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.45■□□□□ 0.7
EPHA3P29320 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.45■□□□□ 0.7
EPHA3P29320 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EPHA3P29320 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHA3P29320 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHA3P29320 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EPHA3P29320 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHA3P29320 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHA3P29320 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.45■□□□□ 0.7
EPHA3P29320 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHA3P29320 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.45■□□□□ 0.7
EPHA3P29320 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHA3P29320 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.45■□□□□ 0.7
EPHA3P29320 AC105265.2-201ENST00000467189 838 ntBASIC19.45■□□□□ 0.7
EPHA3P29320 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.45■□□□□ 0.7
EPHA3P29320 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.45■□□□□ 0.7
EPHA3P29320 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EPHA3P29320 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHA3P29320 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EPHA3P29320 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
EPHA3P29320 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.45■□□□□ 0.7
EPHA3P29320 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EPHA3P29320 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
EPHA3P29320 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EPHA3P29320 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EPHA3P29320 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.44■□□□□ 0.7
EPHA3P29320 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EPHA3P29320 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
EPHA3P29320 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EPHA3P29320 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
EPHA3P29320 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EPHA3P29320 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
EPHA3P29320 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EPHA3P29320 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EPHA3P29320 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EPHA3P29320 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
EPHA3P29320 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.44■□□□□ 0.7
EPHA3P29320 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.44■□□□□ 0.7
EPHA3P29320 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.44■□□□□ 0.7
EPHA3P29320 KRT18P20-201ENST00000548986 1279 ntBASIC19.44■□□□□ 0.7
EPHA3P29320 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.44■□□□□ 0.7
EPHA3P29320 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.44■□□□□ 0.7
EPHA3P29320 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
EPHA3P29320 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
EPHA3P29320 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EPHA3P29320 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
EPHA3P29320 LINC02228-203ENST00000641970 1355 ntBASIC19.44■□□□□ 0.7
EPHA3P29320 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.43■□□□□ 0.7
EPHA3P29320 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
EPHA3P29320 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.43■□□□□ 0.7
EPHA3P29320 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.43■□□□□ 0.7
EPHA3P29320 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.43■□□□□ 0.7
EPHA3P29320 AC142381.2-201ENST00000566120 298 ntBASIC19.43■□□□□ 0.7
EPHA3P29320 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
EPHA3P29320 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
EPHA3P29320 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EPHA3P29320 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.43■□□□□ 0.7
EPHA3P29320 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.42■□□□□ 0.7
EPHA3P29320 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
EPHA3P29320 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.42■□□□□ 0.7
EPHA3P29320 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.42■□□□□ 0.7
EPHA3P29320 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.42■□□□□ 0.7
EPHA3P29320 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.42■□□□□ 0.7
EPHA3P29320 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.42■□□□□ 0.7
EPHA3P29320 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.42■□□□□ 0.7
EPHA3P29320 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EPHA3P29320 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms