Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6V0CP27449 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6V0CP27449 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6V0CP27449 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ATP6V0CP27449 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP6V0CP27449 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16■□□□□ 0.15
ATP6V0CP27449 AC061975.6-201ENST00000579045 1553 ntBASIC16■□□□□ 0.15
ATP6V0CP27449 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ATP6V0CP27449 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16■□□□□ 0.15
ATP6V0CP27449 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
ATP6V0CP27449 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
ATP6V0CP27449 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 PTCHD3P2-201ENST00000424937 1205 ntBASIC16■□□□□ 0.15
ATP6V0CP27449 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 AC239859.2-201ENST00000444165 318 ntBASIC16■□□□□ 0.15
ATP6V0CP27449 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16■□□□□ 0.15
ATP6V0CP27449 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ATP6V0CP27449 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
ATP6V0CP27449 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
ATP6V0CP27449 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ATP6V0CP27449 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16■□□□□ 0.15
ATP6V0CP27449 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP6V0CP27449 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
ATP6V0CP27449 AL032819.2-201ENST00000624543 2162 ntBASIC15.99■□□□□ 0.15
ATP6V0CP27449 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ATP6V0CP27449 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.98■□□□□ 0.15
ATP6V0CP27449 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ATP6V0CP27449 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.98■□□□□ 0.15
ATP6V0CP27449 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ATP6V0CP27449 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
ATP6V0CP27449 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
ATP6V0CP27449 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.98■□□□□ 0.15
ATP6V0CP27449 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0CP27449 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.98■□□□□ 0.15
ATP6V0CP27449 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0CP27449 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0CP27449 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0CP27449 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0CP27449 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0CP27449 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0CP27449 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0CP27449 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
ATP6V0CP27449 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms