Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL1P22362 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL1P22362 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCL1P22362 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL1P22362 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL1P22362 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL1P22362 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL1P22362 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL1P22362 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL1P22362 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL1P22362 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CCL1P22362 AC231657.2-201ENST00000624556 255 ntBASIC17.25■□□□□ 0.35
CCL1P22362 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL1P22362 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL1P22362 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
CCL1P22362 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL1P22362 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.24■□□□□ 0.35
CCL1P22362 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCL1P22362 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.24■□□□□ 0.35
CCL1P22362 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCL1P22362 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL1P22362 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.24■□□□□ 0.35
CCL1P22362 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.24■□□□□ 0.35
CCL1P22362 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 BID-214ENST00000617586 542 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL1P22362 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCL1P22362 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCL1P22362 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL1P22362 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CCL1P22362 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL1P22362 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 AP001271.2-201ENST00000624018 1556 ntBASIC17.23■□□□□ 0.35
CCL1P22362 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.23■□□□□ 0.35
CCL1P22362 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.23■□□□□ 0.35
CCL1P22362 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCL1P22362 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.23■□□□□ 0.35
CCL1P22362 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCL1P22362 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.23■□□□□ 0.35
CCL1P22362 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.23■□□□□ 0.35
CCL1P22362 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.23■□□□□ 0.35
CCL1P22362 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.23■□□□□ 0.35
CCL1P22362 OR10C1-204ENST00000622521 1039 ntBASIC17.23■□□□□ 0.35
CCL1P22362 AC008694.1-202ENST00000636953 945 ntBASIC17.23■□□□□ 0.35
CCL1P22362 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCL1P22362 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.23■□□□□ 0.35
CCL1P22362 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCL1P22362 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCL1P22362 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL1P22362 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL1P22362 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL1P22362 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL1P22362 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.22■□□□□ 0.35
CCL1P22362 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.22■□□□□ 0.35
CCL1P22362 RARRES2P6-201ENST00000567333 442 ntBASIC17.22■□□□□ 0.35
CCL1P22362 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.22■□□□□ 0.35
CCL1P22362 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.22■□□□□ 0.35
CCL1P22362 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.22■□□□□ 0.35
CCL1P22362 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.22■□□□□ 0.35
CCL1P22362 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL1P22362 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL1P22362 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms